VALIDATION LIST NO. 113:

List of new names and new combinations previously effectively, but not validly, published
Int J Syst Evol Microbiol 2007 57: 1. [Abstract] [Full Text] [PDF]  

NOTIFICATION LIST:

Notification that new names and new combinations have appeared in volume 56, part 10, of the IJSEM
Int J Syst Evol Microbiol 2007 57: 2-3. [Abstract] [Full Text] [PDF]  

LIST OF CHANGES IN TAXONOMIC OPINION NO. 5:

Notification of changes in taxonomic opinion previously published outside the IJSEM
Int J Syst Evol Microbiol 2007 57: 4-5. [Abstract] [Full Text] [PDF]  

NEW TAXA: Archaea:

Kristen N. Savage, Lee R. Krumholz, Aharon Oren, and Mostafa S. Elshahed

Haladaptatus paucihalophilus gen. nov., sp. nov., a halophilic archaeon isolated from a low-salt, sulfide-rich spring
Int J Syst Evol Microbiol 2007 57: 19-24. [Abstract] [Full Text] [PDF] [Supplementary Figures]  

Yong Yang, Heng-Lin Cui, Pei-Jin Zhou, and Shuang-Jiang Liu

Haloarcula amylolytica sp. nov., an extremely halophilic archaeon isolated from Aibi salt lake in Xin-Jiang, China
Int J Syst Evol Microbiol 2007 57: 103-106. [Abstract] [Full Text] [PDF] [Supplementary Figure]  

NEW TAXA: Actinobacteria:

Soon Dong Lee

Nocardioides furvisabuli sp. nov., isolated from black sand
Int J Syst Evol Microbiol 2007 57: 35-39. [Abstract] [Full Text] [PDF] [Supplementary Table]  

Marilize le Roes and Paul R. Meyers

Actinomadura rudentiformis sp. nov., isolated from soil
Int J Syst Evol Microbiol 2007 57: 45-50. [Abstract] [Full Text] [PDF] [Extended phylogenetic tree]  

Jung-Hoon Yoon, So-Jung Kang, Seo-Youn Jung, and Tae-Kwang Oh

Humicoccus flavidus gen. nov., sp. nov., isolated from soil
Int J Syst Evol Microbiol 2007 57: 56-59. [Abstract] [Full Text] [PDF]  

Xing-Yu Liu, Bao-Jun Wang, Cheng-Ying Jiang, and Shuang-Jiang Liu

Micrococcus flavus sp. nov., isolated from activated sludge in a bioreactor
Int J Syst Evol Microbiol 2007 57: 66-69. [Abstract] [Full Text] [PDF] [Supplementary Figure and Table]  

Nagamani Bora, Marc Vancanneyt, Roberto Gelsomino, Jean Swings, Noelle Brennan, Timothy M. Cogan, Sandra Larpin, Nathalie Desmasures, Frieda Eliskases Lechner, Reiner M. Kroppenstedt, Alan C. Ward, and Michael Goodfellow

Agrococcus casei sp. nov., isolated from the surfaces of smear-ripened cheeses
Int J Syst Evol Microbiol 2007 57: 92-97. [Abstract] [Full Text] [PDF]  

Jung-Hoon Yoon, So-Jung Kang, Choong-Hwan Lee, and Tae-Kwang Oh

Nocardioides insulae sp. nov., isolated from soil
Int J Syst Evol Microbiol 2007 57: 136-140. [Abstract] [Full Text] [PDF]  

Hana Yi, Peter Schumann, and Jongsik Chun

Demequina aestuarii gen. nov., sp. nov., a novel actinomycete of the suborder Micrococcineae, and reclassification of Cellulomonas fermentans Bagnara et al. 1985 as Actinotalea fermentans gen. nov., comb. nov.
Int J Syst Evol Microbiol 2007 57: 151-156. [Abstract] [Full Text] [PDF]  

NEW TAXA: Other Gram-positive Bacteria:

Yuchao Ma, Zhiqiang Xia, Xuming Liu, and Sanfeng Chen

Paenibacillus sabinae sp. nov., a nitrogen-fixing species isolated from the rhizosphere soils of shrubs
Int J Syst Evol Microbiol 2007 57: 6-11. [Abstract] [Full Text] [PDF]  

Sun-Young An, Mika Asahara, Keiichi Goto, Hiroaki Kasai, and Akira Yokota

Terribacillus saccharophilus gen. nov., sp. nov. and Terribacillus halophilus sp. nov., spore-forming bacteria isolated from field soil in Japan
Int J Syst Evol Microbiol 2007 57: 51-55. [Abstract] [Full Text] [PDF] [Supplementary Table]  

Cheng-Hui Xie and Akira Yokota

Paenibacillus terrigena sp. nov., isolated from soil
Int J Syst Evol Microbiol 2007 57: 70-72. [Abstract] [Full Text] [PDF]  

Anna H. Kaksonen, Stefan Spring, Peter Schumann, Reiner M. Kroppenstedt, and Jaakko A. Puhakka

Desulfovirgula thermocuniculi gen. nov., sp. nov., a thermophilic sulfate-reducer isolated from a geothermal underground mine in Japan
Int J Syst Evol Microbiol 2007 57: 98-102. [Abstract] [Full Text] [PDF]  

Min-Ju Park, Ho-Bin Kim, Dong-Shan An, Hee-Chan Yang, Seok-Tae Oh, Hae-Jung Chung, and Deok-Chun Yang

Paenibacillus soli sp. nov., a xylanolytic bacterium isolated from soil
Int J Syst Evol Microbiol 2007 57: 146-150. [Abstract] [Full Text] [PDF] [Supplementary Figures][Supplementary Figures]  

NEW TAXA: Proteobacteria:

Young-Do Nam, Ho-Won Chang, Ja Ryeong Park, Hyuk-Yong Kwon, Zhe-Xue Quan, Yong-Ha Park, Jung-Sook Lee, Jung-Hoon Yoon, and Jin-Woo Bae

Pseudoalteromonas marina sp. nov., a marine bacterium isolated from tidal flats of the Yellow Sea, and reclassification of Pseudoalteromonas sagamiensis as Algicola sagamiensis comb. nov.
Int J Syst Evol Microbiol 2007 57: 12-18. [Abstract] [Full Text] [PDF]  

Shipeng Lu, Seung Hyun Ryu, Bok Sil Chung, Young Ryun Chung, Woojun Park, and Che Ok Jeon

Simplicispira limi sp. nov., isolated from activated sludge
Int J Syst Evol Microbiol 2007 57: 31-34. [Abstract] [Full Text] [PDF] [Supplementary Figure]  

Xiang Xiao, Peng Wang, Xiang Zeng, Douglas Hoyt Bartlett, and Fengping Wang

Shewanella psychrophila sp. nov. and Shewanella piezotolerans sp. nov., isolated from west Pacific deep-sea sediment
Int J Syst Evol Microbiol 2007 57: 60-65. [Abstract] [Full Text] [PDF]  

Jung-Hoon Yoon, So-Jung Kang, and Tae-Kwang Oh

Donghicola eburneus gen. nov., sp. nov., isolated from seawater of the East Sea in Korea
Int J Syst Evol Microbiol 2007 57: 73-76. [Abstract] [Full Text] [PDF] [Supplementary Figure]  

Ho-Won Chang, Young-Do Nam, Hyuk-Yong Kwon, Ja Ryeong Park, Jung-Sook Lee, Jung-Hoon Yoon, Kwang-Guk An, and Jin-Woo Bae

Marinobacterium halophilum sp. nov., a marine bacterium isolated from the Yellow Sea
Int J Syst Evol Microbiol 2007 57: 77-80. [Abstract] [Full Text] [PDF] [Erratum]  

Birgit Geueke, Hans-Jürgen Busse, Thomas Fleischmann, Peter Kämpfer, and Hans-Peter E. Kohler

Description of Sphingosinicella xenopeptidilytica sp. nov., a -peptide-degrading species, and emended descriptions of the genus Sphingosinicella and the species Sphingosinicella microcystinivorans
Int J Syst Evol Microbiol 2007 57: 107-113. [Abstract] [Full Text] [PDF] [Supplementary Figure]  

Elizabeth Mary Jordan, Fabiano L. Thompson, Xiao-Hua Zhang, Yun Li, Marc Vancanneyt, Reiner M. Kroppenstedt, Fergus G. Priest, and Brian Austin

Sneathiella chinensis gen. nov., sp. nov., a novel marine alphaproteobacterium isolated from coastal sediment in Qingdao, China
Int J Syst Evol Microbiol 2007 57: 114-121. [Abstract] [Full Text] [PDF]  

Seung-Hee Yoo, Byung-Yong Kim, Hang-Yeon Weon, Soon-Wo Kwon, Seung-Joo Go, and Erko Stackebrandt

Burkholderia soli sp. nov., isolated from soil cultivated with Korean ginseng
Int J Syst Evol Microbiol 2007 57: 122-125. [Abstract] [Full Text] [PDF] [Supplementary Figure]  

Jun Gu, Bin Guo, Ya-Nan Wang, Su-Lin Yu, Ryuhei Inamori, Ri Qu, Yu-Guang Ye, and Xiao-Lei Wu

Oceanicola nanhaiensis sp. nov., isolated from sediments of the South China Sea
Int J Syst Evol Microbiol 2007 57: 157-160. [Abstract] [Full Text] [PDF] [Supplementary Figure]  

NEW TAXA: Bacteroidetes:

Zhe-Xue Quan, Kwang Kyu Kim, Myung-Kyum Kim, Long Jin, and Sung-Taik Lee

Chryseobacterium caeni sp. nov., isolated from bioreactor sludge
Int J Syst Evol Microbiol 2007 57: 141-145. [Abstract] [Full Text] [PDF] [Supplementary Table]  

NEW TAXA: Other Bacteria:

Elizabeth Miranda-Tello, Marie-Laure Fardeau, Catherine Joulian, Michel Magot, Pierre Thomas, Jean-Luc Tholozan, and Bernard Ollivier

Petrotoga halophila sp. nov., a thermophilic, moderately halophilic, fermentative bacterium isolated from an offshore oil well in Congo
Int J Syst Evol Microbiol 2007 57: 40-44. [Abstract] [Full Text] [PDF]  

Evgenya S. Shelobolina, Kelly P. Nevin, Jessie D. Blakeney-Hayward, Claudia V. Johnsen, Todd W. Plaia, Paul Krader, Trevor Woodard, Dawn E. Holmes, Catherine Gaw VanPraagh, and Derek R. Lovley

Geobacter pickeringii sp. nov., Geobacter argillaceus sp. nov. and Pelosinus fermentans gen. nov., sp. nov., isolated from subsurface kaolin lenses
Int J Syst Evol Microbiol 2007 57: 126-135. [Abstract] [Full Text] [PDF] [Erratum]  

Carlos A. Rosa, Marc-André Lachance, Lia C. R. S. Teixeira, Raphael S. Pimenta, and Paula B. Morais

Metschnikowia cerradonensis sp. nov., a yeast species isolated from ephemeral flowers and their nitidulid beetles in Brazil
Int J Syst Evol Microbiol 2007 57: 161-165. [Abstract] [Full Text] [PDF]  

EVOLUTION, PHYLOGENY AND BIODIVERSITY:

Mohammad Monir Shah, Hirotoshi Iihara, Makiko Noda, Sun Xiao Song, Pham Hong Nhung, Kiyofumi Ohkusu, Yoshiaki Kawamura, and Takayuki Ezaki

dnaJ gene sequence-based assay for species identification and phylogenetic grouping in the genus Staphylococcus
Int J Syst Evol Microbiol 2007 57: 25-30. [Abstract] [Full Text] [PDF] [Supplementary Table]  

METHODS:

Johan Goris, Konstantinos T. Konstantinidis, Joel A. Klappenbach, Tom Coenye, Peter Vandamme, and James M. Tiedje

DNA–DNA hybridization values and their relationship to whole-genome sequence similarities
Int J Syst Evol Microbiol 2007 57: 81-91. [Abstract] [Full Text] [PDF]  

INTERNATIONAL COMMITTEE ON SYSTEMATICS OF PROKARYOTES:

Henrik Christensen, Peter Kuhnert, Hans-Jürgen Busse, Wilhelm C. Frederiksen, and Magne Bisgaard

Proposed minimal standards for the description of genera, species and subspecies of the Pasteurellaceae
Int J Syst Evol Microbiol 2007 57: 166-178. [Abstract] [Full Text] [PDF] [Erratum]  

INTERNATIONAL COMMITTEE ON SYSTEMATICS OF PROKARYOTES: Taxonomic Notes:

Erika M. Tóth, Andrea K. Borsodi, Jean P. Euzéby, Brian J. Tindall, and Károly Márialigeti

Proposal to replace the illegitimate genus name Schineria Tóth et al. 2001 with the genus name Ignatzschineria gen. nov. and to replace the illegitimate combination Schineria larvae Tóth et al. 2001 with Ignatzschineria larvae comb. nov.
Int J Syst Evol Microbiol 2007 57: 179-180. [Abstract] [Full Text] [PDF]  

INTERNATIONAL COMMITTEE ON SYSTEMATICS OF PROKARYOTES: Minutes:

Karl-Erik Johansson and Janet M. Bradbury

International Committee on Systematics of Prokaryotes; Subcommittee on the taxonomy of Mollicutes: Minutes of the meetings, 7 and 12 July 2002, Vienna, Austria
Int J Syst Evol Microbiol 2007 57: 181-186. [Full Text] [PDF]  

Janet M. Bradbury

International Committee on Systematics of Prokaryotes; Subcommittee on the taxonomy of Mollicutes: Minutes of the meetings, 11 and 16 July 2004, Athens, GA, USA
Int J Syst Evol Microbiol 2007 57: 187-191. [Full Text] [PDF]  

Daniel R. Brown and Janet M. Bradbury

International Committee on Systematics of Prokaryotes; Subcommittee on the taxonomy of Mollicutes: Minutes of the meetings, 8, 9 and 14 July 2006, Cambridge, UK
Int J Syst Evol Microbiol 2007 57: 192-196. [Full Text] [PDF]  

ERRATA:

Paul R. Meyers, Candice M. Goodwin, Jessica A. Bennett, Bronwen L. Aken, Claire E. Price, and Jason M. van Rooyen

Streptomyces africanus sp. nov., a novel streptomycete with blue aerial mycelium
Int J Syst Evol Microbiol 2007 57: 197. [Full Text] [PDF]  

On On Lee, Stanley C. K. Lau, Mandy M. Y. Tsoi, Xiancui Li, Ioulia Plakhotnikova, Sergey Dobretsov, Madeline C. S. Wu, Po-Keung Wong, and Pei-Yuan Qian

Gillisia myxillae sp. nov., a novel member of the family Flavobacteriaceae, isolated from the marine sponge Myxilla incrustans
Int J Syst Evol Microbiol 2007 57: 197. [Full Text] [PDF]  

Wasu Pathom-aree, Yuichi Nogi, Alan C. Ward, Koki Horikoshi, Alan T. Bull, and Michael Goodfellow

Dermacoccus barathri sp. nov. and Dermacoccus profundi sp. nov., novel actinomycetes isolated from deep-sea mud of the Mariana Trench
Int J Syst Evol Microbiol 2007 57: 197. [Full Text] [PDF]  

Donovan P. Kelly, Jean P. Euzéby, Celia F. Goodhew, and Ann P. Wood

Redefining Paracoccus denitrificans and Paracoccus pantotrophus and the case for a reassessment of the strains held by international culture collections
Int J Syst Evol Microbiol 2007 57: 198. [Full Text] [PDF]  

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