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1 Bioinformatics & Systematics Laboratory, Korean Collection for Type Cultures, Korea Research Institute of Bioscience and Biotechnology, Korea Institute of Science and Technology, Daeduk Science Park, Taejeon, Republic of Korea
2 Department of Biological Science, Korea Advanced Institute of Science and Technology, Taejeon, Republic of Korea
4 Daesung Microbiology Institute Co., Seoul, Republic of Korea
3 Department of Microbiology, The Medical School, University of Newcastle upon Tyne, Newcastle upon Tyne, NE2 4HH, United Kingdom
* Corresponding author. Phone: 82-42-860-4620. Fax: 82-42-860-4625. Electronic mail address: yhpark{at}gerigw.geri.re.kr.
ABSTRACT
Restriction digestion fragments of DNAs extracted from 14 representative strains of Saccharomonospora azurea, "Saccharomonospora caesia," Saccharomonospora cyanea, Saccharomonospora glauca, and Saccharomonospora viridis and six "Saccharomonospora"-like isolates were separated by electrophoresis, Southern blotted onto nylon membranes, and hybridized by using two rRNA gene probes cloned from Streptomyces griseus subsp. griseus KCTC 9080. The following four restriction endonucleases were used: Bam HI, Sal I, Pvu II, and Xho I. The resultant five ribotype patterns were considered species specific. The genomic diversity revealed by ribotyping indicates that this method can be used to both characterize and identify saccharomonosporae. All of the test strains contained DNA with three rRNA gene clusters.
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S.-Y. Lee, W.-Y. Choi, T.-K. Oh, and J.-H. Yoon Lentibacillus salinarum sp. nov., isolated from a marine solar saltern in Korea Int J Syst Evol Microbiol, January 1, 2008; 58(1): 45 - 49. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, S. Park, and T.-K. Oh Daeguia caeni gen. nov., sp. nov., isolated from sludge of a textile dye works Int J Syst Evol Microbiol, January 1, 2008; 58(1): 168 - 172. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, J.-S. Lee, S.-W. Nam, W. Kim, and T.-K. Oh Sphingosinicella soli sp. nov., isolated from an alkaline soil in Korea Int J Syst Evol Microbiol, January 1, 2008; 58(1): 173 - 177. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, S.-Y. Lee, and T.-K. Oh Sphingomonas insulae sp. nov., isolated from soil Int J Syst Evol Microbiol, January 1, 2008; 58(1): 231 - 236. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-Y. Jung, S.-J. Kang, Y.-T. Jung, and T.-K. Oh Salegentibacter salarius sp. nov., isolated from a marine solar saltern Int J Syst Evol Microbiol, December 1, 2007; 57(12): 2738 - 2742. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, S. Park, S.-Y. Lee, and T.-K. Oh Reclassification of Aquaspirillum itersonii and Aquaspirillum peregrinum as Novispirillum itersonii gen. nov., comb. nov. and Insolitispirillum peregrinum gen. nov., comb. nov. Int J Syst Evol Microbiol, December 1, 2007; 57(12): 2830 - 2835. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, and T.-K. Oh Pedobacter terrae sp. nov., isolated from soil Int J Syst Evol Microbiol, November 1, 2007; 57(11): 2462 - 2466. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, H. W. Oh, and T.-K. Oh Roseomonas terrae sp. nov. Int J Syst Evol Microbiol, November 1, 2007; 57(11): 2485 - 2488. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, P. Schumann, and T.-K. Oh Cellulosimicrobium terreum sp. nov., isolated from soil Int J Syst Evol Microbiol, November 1, 2007; 57(11): 2493 - 2497. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-Y. Jung, Y.-T. Jung, and T.-K. Oh Idiomarina salinarum sp. nov., isolated from a marine solar saltern in Korea Int J Syst Evol Microbiol, November 1, 2007; 57(11): 2503 - 2506. [Abstract] [Full Text] [PDF]
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C. O. Jeon, J.-M. Lim, J. R. Lee, G. S. Lee, D.-J. Park, J.-C. Lee, H.-W. Oh, and C.-J. Kim Halomonas kribbensis sp. nov., a novel moderately halophilic bacterium isolated from a solar saltern in Korea Int J Syst Evol Microbiol, October 1, 2007; 57(10): 2194 - 2198. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, J.-S. Lee, H. W. Oh, and T.-K. Oh Brevundimonas lenta sp. nov., isolated from soil Int J Syst Evol Microbiol, October 1, 2007; 57(10): 2236 - 2240. [Abstract] [Full Text] [PDF]
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S.-Y. Jung, M.-H. Lee, T.-K. Oh, and J.-H. Yoon Herbaspirillum rhizosphaerae sp. nov., isolated from rhizosphere soil of Allium victorialis var. platyphyllum Int J Syst Evol Microbiol, October 1, 2007; 57(10): 2284 - 2288. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-Y. Jung, S.-J. Kang, and T.-K. Oh Microbulbifer celer sp. nov., isolated from a marine solar saltern of the Yellow Sea in Korea Int J Syst Evol Microbiol, October 1, 2007; 57(10): 2365 - 2369. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, and T.-K. Oh Reclassification of Marinococcus albus Hao et al. 1985 as Salimicrobium album gen. nov., comb. nov. and Bacillus halophilus Ventosa et al. 1990 as Salimicrobium halophilum comb. nov., and description of Salimicrobium luteum sp. nov. Int J Syst Evol Microbiol, October 1, 2007; 57(10): 2406 - 2411. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, H. W. Oh, and T.-K. Oh Pedobacter insulae sp. nov., isolated from soil Int J Syst Evol Microbiol, September 1, 2007; 57(9): 1999 - 2003. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, Y.-T. Jung, and T.-K. Oh Halobacillus campisalis sp. nov., containing meso-diaminopimelic acid in the cell-wall peptidoglycan, and emended description of the genus Halobacillus Int J Syst Evol Microbiol, September 1, 2007; 57(9): 2021 - 2025. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, S. Park, and T.-K. Oh Pedobacter lentus sp. nov. and Pedobacter terricola sp. nov., isolated from soil Int J Syst Evol Microbiol, September 1, 2007; 57(9): 2089 - 2095. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, M.-H. Lee, S.-J. Kang, and T.-K. Oh Marinobacter salicampi sp. nov., isolated from a marine solar saltern in Korea Int J Syst Evol Microbiol, September 1, 2007; 57(9): 2102 - 2105. [Abstract] [Full Text] [PDF]
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S.-Y. Jung, H.-S. Kim, J. J. Song, S.-G. Lee, T.-K. Oh, and J.-H. Yoon Aestuariimicrobium kwangyangense gen. nov., sp. nov., an LL-diaminopimelic acid-containing bacterium isolated from tidal flat sediment Int J Syst Evol Microbiol, September 1, 2007; 57(9): 2114 - 2118. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, S. Park, and T.-K. Oh Jannaschia donghaensis sp. nov., isolated from seawater of the East Sea, Korea Int J Syst Evol Microbiol, September 1, 2007; 57(9): 2132 - 2136. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, M.-H. Lee, and T.-K. Oh Description of Sulfitobacter donghicola sp. nov., isolated from seawater of the East Sea in Korea, transfer of Staleya guttiformis Labrenz et al. 2000 to the genus Sulfitobacter as Sulfitobacter guttiformis comb. nov. and emended description of the genus Sulfitobacter Int J Syst Evol Microbiol, August 1, 2007; 57(8): 1788 - 1792. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, S.-Y. Lee, and T.-K. Oh Loktanella maricola sp. nov., isolated from seawater of the East Sea in Korea Int J Syst Evol Microbiol, August 1, 2007; 57(8): 1799 - 1802. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S. E. Park, S.-J. Kang, and T.-K. Oh Rheinheimera aquimaris sp. nov., isolated from seawater of the East Sea in Korea Int J Syst Evol Microbiol, July 1, 2007; 57(7): 1386 - 1390. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, W. Kim, and T.-K. Oh Pigmentiphaga daeguensis sp. nov., isolated from wastewater of a dye works, and emended description of the genus Pigmentiphaga Int J Syst Evol Microbiol, June 1, 2007; 57(6): 1188 - 1191. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, S. Park, and T.-K. Oh Caenispirillum bisanense gen. nov., sp. nov., isolated from sludge of a dye works Int J Syst Evol Microbiol, June 1, 2007; 57(6): 1217 - 1221. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, S. Park, and T.-K. Oh Devosia insulae sp. nov., isolated from soil, and emended description of the genus Devosia Int J Syst Evol Microbiol, June 1, 2007; 57(6): 1310 - 1314. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, and T.-K. Oh Chryseobacterium daeguense sp. nov., isolated from wastewater of a textile dye works Int J Syst Evol Microbiol, June 1, 2007; 57(6): 1355 - 1359. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, J.-S. Lee, and T.-K. Oh Flavobacterium terrigena sp. nov., isolated from soil Int J Syst Evol Microbiol, May 1, 2007; 57(5): 947 - 950. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, S.-Y. Lee, and T.-K. Oh Phaeobacter daeponensis sp. nov., isolated from a tidal flat of the Yellow Sea in Korea Int J Syst Evol Microbiol, April 1, 2007; 57(4): 856 - 861. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-Y. Lee, S.-J. Kang, C.-H. Lee, and T.-K. Oh Pseudoruegeria aquimaris gen. nov., sp. nov., isolated from seawater of the East Sea in Korea Int J Syst Evol Microbiol, March 1, 2007; 57(3): 542 - 547. [Abstract] [Full Text] [PDF]
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S.-Y. Jung, S.-Y. Lee, T.-K. Oh, and J.-H. Yoon Agromyces allii sp. nov., isolated from the rhizosphere of Allium victorialis var. platyphyllum Int J Syst Evol Microbiol, March 1, 2007; 57(3): 588 - 593. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, and T.-K. Oh Sulfitobacter marinus sp. nov., isolated from seawater of the East Sea in Korea Int J Syst Evol Microbiol, February 1, 2007; 57(2): 302 - 305. [Abstract] [Full Text] [PDF]
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S.-Y. Jung, Y.-T. Jung, T.-K. Oh, and J.-H. Yoon Photobacterium lutimaris sp. nov., isolated from a tidal flat sediment in Korea Int J Syst Evol Microbiol, February 1, 2007; 57(2): 332 - 336. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, S.-Y. Jung, and T.-K. Oh Humicoccus flavidus gen. nov., sp. nov., isolated from soil Int J Syst Evol Microbiol, January 1, 2007; 57(1): 56 - 59. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, and T.-K. Oh Donghicola eburneus gen. nov., sp. nov., isolated from seawater of the East Sea in Korea Int J Syst Evol Microbiol, January 1, 2007; 57(1): 73 - 76. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, P. Schumann, S.-J. Kang, S.-Y. Jung, and T.-K. Oh Isoptericola dokdonensis sp. nov., isolated from soil Int J Syst Evol Microbiol, December 1, 2006; 56(12): 2893 - 2897. [Abstract] [Full Text] [PDF]
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J.-M. Lim, C. O. Jeon, and C.-J. Kim Bacillus taeanensis sp. nov., a halophilic Gram-positive bacterium from a solar saltern in Korea Int J Syst Evol Microbiol, December 1, 2006; 56(12): 2903 - 2908. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, J.-S. Lee, and T.-K. Oh Brevundimonas terrae sp. nov., isolated from an alkaline soil in Korea Int J Syst Evol Microbiol, December 1, 2006; 56(12): 2915 - 2919. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-Y. Jung, W. Kim, S.-W. Nam, and T.-K. Oh Nesterenkonia jeotgali sp. nov., isolated from jeotgal, a traditional Korean fermented seafood. Int J Syst Evol Microbiol, November 1, 2006; 56(Pt 11): 2587 - 2592. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, P. Schumann, and T.-K. Oh Yonghaparkia alkaliphila gen. nov., sp. nov., a novel member of the family Microbacteriaceae isolated from an alkaline soil. Int J Syst Evol Microbiol, October 1, 2006; 56(Pt 10): 2415 - 2420. [Abstract] [Full Text] [PDF]
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S.-Y. Jung, H.-S. Kim, J. J. Song, S.-G. Lee, T.-K. Oh, and J.-H. Yoon Kribbia dieselivorans gen. nov., sp. nov., a novel member of the family Intrasporangiaceae. Int J Syst Evol Microbiol, October 1, 2006; 56(Pt 10): 2427 - 2432. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, M.-H. Lee, S.-J. Kang, S.-Y. Lee, and T.-K. Oh Sphingomonas dokdonensis sp. nov., isolated from soil. Int J Syst Evol Microbiol, September 1, 2006; 56(Pt 9): 2165 - 2169. [Abstract] [Full Text] [PDF]
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J.-C. Lee, J.-M. Lim, D.-J. Park, C. O. Jeon, W.-J. Li, and C.-J. Kim Bacillus seohaeanensis sp. nov., a halotolerant bacterium that contains L-lysine in its cell wall. Int J Syst Evol Microbiol, August 1, 2006; 56(Pt 8): 1893 - 1898. [Abstract] [Full Text] [PDF]
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S.-Y. Jung, T.-K. Oh, and J.-H. Yoon Tenacibaculum aestuarii sp. nov., isolated from a tidal flat sediment in Korea. Int J Syst Evol Microbiol, July 1, 2006; 56(Pt 7): 1577 - 1581. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, and T.-K. Oh Polaribacter dokdonensis sp. nov., isolated from seawater Int J Syst Evol Microbiol, June 1, 2006; 56(6): 1251 - 1255. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, M.-H. Lee, S.-J. Kang, S.-Y. Park, and T.-K. Oh Pedobacter sandarakinus sp. nov., isolated from soil Int J Syst Evol Microbiol, June 1, 2006; 56(6): 1273 - 1277. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, H. W. Oh, and T.-K. Oh Stenotrophomonas dokdonensis sp. nov., isolated from soil Int J Syst Evol Microbiol, June 1, 2006; 56(6): 1363 - 1367. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, and T.-K. Oh Flavobacterium soli sp. nov., isolated from soil. Int J Syst Evol Microbiol, May 1, 2006; 56(Pt 5): 997 - 1000. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, M.-H. Lee, H. W. Oh, and T.-K. Oh Porphyrobacter dokdonensis sp. nov., isolated from sea water. Int J Syst Evol Microbiol, May 1, 2006; 56(Pt 5): 1079 - 1083. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, M.-H. Lee, S.-J. Kang, and T.-K. Oh Algoriphagus terrigena sp. nov., isolated from soil. Int J Syst Evol Microbiol, April 1, 2006; 56(Pt 4): 777 - 780. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, and T.-K. Oh Variovorax dokdonensis sp. nov., isolated from soil. Int J Syst Evol Microbiol, April 1, 2006; 56(Pt 4): 811 - 814. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, H. W. Oh, J.-S. Lee, and T.-K. Oh Brevundimonas kwangchunensis sp. nov., isolated from an alkaline soil in Korea. Int J Syst Evol Microbiol, March 1, 2006; 56(Pt 3): 613 - 617. [Abstract] [Full Text] [PDF]
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S.-Y. Jung, T.-K. Oh, and J.-H. Yoon Colwellia aestuarii sp. nov., isolated from a tidal flat sediment in Korea Int J Syst Evol Microbiol, January 1, 2006; 56(1): 33 - 37. [Abstract] [Full Text] [PDF]
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J.-M. Lim, C. O. Jeon, J.-C. Lee, Y. J. Ju, D.-J. Park, and C.-J. Kim Bacillus koreensis sp. nov., a spore-forming bacterium, isolated from the rhizosphere of willow roots in Korea Int J Syst Evol Microbiol, January 1, 2006; 56(1): 59 - 63. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, S.-Y. Jung, H. W. Oh, and T.-K. Oh Gaetbulimicrobium brevivitae gen. nov., sp. nov., a novel member of the family Flavobacteriaceae isolated from a tidal flat of the Yellow Sea in Korea Int J Syst Evol Microbiol, January 1, 2006; 56(1): 115 - 119. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, and T.-K. Oh Dokdonella koreensis gen. nov., sp. nov., isolated from soil Int J Syst Evol Microbiol, January 1, 2006; 56(1): 145 - 150. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, C.-H. Lee, and T.-K. Oh Donghaeana dokdonensis gen. nov., sp. nov., isolated from sea water Int J Syst Evol Microbiol, January 1, 2006; 56(1): 187 - 191. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, and T.-K. Oh Marinomonas dokdonensis sp. nov., isolated from sea water Int J Syst Evol Microbiol, November 1, 2005; 55(6): 2303 - 2307. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, C.-H. Lee, and T.-K. Oh Dokdonia donghaensis gen. nov., sp. nov., isolated from sea water Int J Syst Evol Microbiol, November 1, 2005; 55(6): 2323 - 2328. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, S.-H. Yeo, and T.-K. Oh Paenibacillus alkaliterrae sp. nov., isolated from an alkaline soil in Korea Int J Syst Evol Microbiol, November 1, 2005; 55(6): 2339 - 2344. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, C.-H. Lee, H. W. Oh, and T.-K. Oh Halobacillus yeomjeoni sp. nov., isolated from a marine solar saltern in Korea Int J Syst Evol Microbiol, November 1, 2005; 55(6): 2413 - 2417. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, S.-Y. Lee, M.-H. Lee, and T.-K. Oh Virgibacillus dokdonensis sp. nov., isolated from a Korean island, Dokdo, located at the edge of the East Sea in Korea Int J Syst Evol Microbiol, September 1, 2005; 55(5): 1833 - 1837. [Abstract] [Full Text] [PDF]
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S.-Y. Jung, S.-J. Kang, M.-H. Lee, S.-Y. Lee, T.-K. Oh, and J.-H. Yoon Gaetbulibacter saemankumensis gen. nov., sp. nov., a novel member of the family Flavobacteriaceae isolated from a tidal flat sediment in Korea Int J Syst Evol Microbiol, September 1, 2005; 55(5): 1845 - 1849. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, C.-H. Lee, S.-J. Kang, and T.-K. Oh Psychrobacter celer sp. nov., isolated from sea water of the South Sea in Korea Int J Syst Evol Microbiol, September 1, 2005; 55(5): 1885 - 1890. [Abstract] [Full Text] [PDF]
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J.-H. Yoon and T.-K. Oh Bacillus litoralis sp. nov., isolated from a tidal flat of the Yellow Sea in Korea Int J Syst Evol Microbiol, September 1, 2005; 55(5): 1945 - 1948. [Abstract] [Full Text] [PDF]
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J.-C. Lee, C. O. Jeon, J.-M. Lim, S.-M. Lee, J.-M. Lee, S.-M. Song, D.-J. Park, W.-J. Li, and C.-J. Kim Halomonas taeanensis sp. nov., a novel moderately halophilic bacterium isolated from a solar saltern in Korea Int J Syst Evol Microbiol, September 1, 2005; 55(5): 2027 - 2032. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, S.-Y. Lee, C.-H. Lee, and T.-K. Oh Maribacter dokdonensis sp. nov., isolated from sea water off a Korean island, Dokdo Int J Syst Evol Microbiol, September 1, 2005; 55(5): 2051 - 2055. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, C.-H. Lee, and T.-K. Oh Aeromicrobium alkaliterrae sp. nov., isolated from an alkaline soil, and emended description of the genus Aeromicrobium Int J Syst Evol Microbiol, September 1, 2005; 55(5): 2171 - 2175. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, I.-G. Kim, M.-H. Lee, and T.-K. Oh Nocardioides kribbensis sp. nov., isolated from an alkaline soil Int J Syst Evol Microbiol, July 1, 2005; 55(4): 1611 - 1614. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, S.-J. Kang, and T.-K. Oh Algoriphagus locisalis sp. nov., isolated from a marine solar saltern Int J Syst Evol Microbiol, July 1, 2005; 55(4): 1635 - 1639. [Abstract] [Full Text] [PDF]
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J.-H. Yoon, C.-H. Lee, S.-H. Yeo, and T.-K. Oh Psychrobacter aquimaris sp. nov. and Psychrobacter namhaensis sp. nov., isolated from sea water of the South Sea in Korea Int J Syst Evol Microbiol, May 1, 2005; 55(3): 1007 - 1013. [Abstract] [Full Text] [PDF]
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