Lactobacillus phylogenomics – towards a reclassification of the genus, by M. J. Claesson, D. van Sinderen and P. W. O'Toole
International Journal of Systematic and Evolutionary Microbiology vol. 58, part 12, pp. 2945 - 2954
Supplementary Fig. S1. Supernetwork based on a combination of 141 separate protein trees. [PDF] (18 KB)
Supplementary Table S1. Robinson–Foulds distances between the five different trees.
Supplementary Table S2. Mean percentage identity between all 16S rRNA genes for each of the 18 taxa.
Supplementary Table S3. Distances and numbers of detected orthologues.
[PDF file of Supplementary Tables S1-S3] (20 KB)
Supplementary Table S4. Breakdown of all protein collections in Table 1, group-specific present and absent proteins, Lactobacillus-specific proteins and meat-specific proteins into protein locus tags, functional annotation and low-level COG categories. [Excel file] (422 KB)
