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1 Department of Biology, University of Western Ontario, London, Ontario, Canada N6A 5B7
2 Department of Entomology, Cornell University, Ithaca, NY 14853, USA
3 Department of Biology, Syracuse University, Syracuse, NY 13244, USA
Correspondence
Marc-André Lachance
lachance{at}uwo.ca
| ABSTRACT |
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The GenBank/EMBL/DDBJ accession numbers for the ITS/5·8S and D1/D2 LSU rDNA sequences of the novel isolates identified in this study are shown in Fig. 2
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| INTRODUCTION |
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| METHODS |
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Yeast systematics.
Delineation and identification of heterothallic, haplontic Metschnikowia species were based primarily on mating reactions. Active cultures were mixed in pairs on yeast carbon base (Difco) supplemented with 0·01 % ammonium sulphate, incubated at 18 °C and examined periodically for the formation of zygotes, asci or ascospores. Authentic strains of previously described species were included in experiments as appropriate. Any questionable identification was verified by rDNA sequencing and then reconfirmed by mating. The internal transcribed spacers, the 5·8S gene and the D1/D2 variable domains of the large subunit were amplified directly from whole cells with primers IT1 and NL4 as described previously (Marinoni & Lachance, 2004
). The PCR products were sequenced at the Robarts Research Institute (London, Ontario, Canada). Sequence alignment was performed with the integrated software package DNAMAN (Lynnon Biosoft). Tree construction was based on the program DNAPARS of the PHYLIP package (version 3.6; J. Felsenstein). Morphological and physiological characterization followed the methods of Yarrow (1998)
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| RESULTS AND DISCUSSION |
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-lactonum, acidum gluconicum, 2-ketogluconatum, N-acetylglucosaminum, ethyl acetas (lente) et hexadecanum, at non inulinum, raffinosum, melibiosum, lactosum, methyl-
-D-glucosidum, amylum solubile, L-rhamnosum, L-arabinosum, D-arabinosum, D-ribosum (aliquando exigue aut lente), methanolum, 1-propanolum, 2-propanolum, 1-butanolum, erythritolum, galactitolum, meso-inositolum, acidum lacticum, glucosaminum (aliquando lente) nec acetonum. Ethylaminum, lysinum et cadaverinum assimilantur at non natrium nitricum nec natrium nitrosum. Ad crescentiam vitaminae externae necessariae sunt. Augmentum in 27 °C, at non 29 °C. Habitat Prosopeus cf. bidens e floribus variebus in Hawaii. Typus UWOPS 04-207.1 (h+). Allotypus UWOPS 04-204.1. In collectione zymotica Centraalbureau voor Schimmelcultures, Trajectum ad Rhenum, sub no. CBS 10056T et CBS 10055 depositae sunt.
Description of Metschnikowia hamakuensis Lachance sp. nov.
Metschnikowia hamakuensis (ha.ma.ku.en'sis. L. nom. sing. f. adj. hamakuensis of Hamakua, referring to the Upper Hamakua ditch, Kohala Mountain, Hawai'i, where all known strains of this species were recovered).
On YM agar after 3 days at 25 °C, cells are spherical to ovoidal, occur singly, in parentbud pairs or in short chains, and measure 24x36 µm. Highly refringent cells, as well as very long germ tubes, can be observed on occasion. After 2 weeks, colonies are low-convex to convex, glossy, white, small to medium, and butyrous or leathery due to intertwined tubes. In Dalmau plate culture on yeast carbon base agar after 2 weeks, pseudohyphae are formed (Fig. 1b
). On yeast carbon base agar at 18 °C, mixtures of cells of complementary mating types give rise to zygotes and asci after 612 h. After 3 days, mature asci containing two acicular ascospores (1·31·6x4060 µm) are formed in a persistent ascus that retains more or less conspicuous vestiges of the conjugated parent cells (Fig. 1a
). Fermentation: in glucose, gas production begins after 34 days and a full tube of gas develops after 10 days. In some strains fermentation is delayed and much weaker. Of other assimilated sugars, only trehalose is fermented weakly in some strains. Other growth test responses are given in Table 2
.
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The type strain of M. hamakuensis is strain UWOPS 04-207.1T (h+), recovered from Prosopeus cf. bidens on flowers of Broussaisia arguta. The designated allotype is strain UWOPS 04-204.1 (h), recovered from Prosopeus cf. bidens on flowers of Ilex anomala. The type locality is the upper Hamakua ditch, Kohala Mountain, Hawai'i. These strains have been deposited in the collection of the Yeast Division of the Centraalbureau voor Schimmelcultures, Utrecht, the Netherlands, as strains CBS 10056T (=NRRL Y-27834T) and CBS 10055 (=NRRL Y-27833), respectively.
Latin diagnosis of Metschnikowia kamakouana Lachance sp. nov.
In medio YM post dies tres cellulae singulae, binae, aut in catenis brevis, globosae aut ovoidae (24x36 µm), aliquando cum tubis longibus. Cultura in agaro malti post dies 14 infimo-convexa, tumulosa, glabra, candida et butyrosa. In agaro carbonis fundamento post dies 14 pseudomycelium formatur. Post dies unus, cellulae stirpum interfertilium mixtarum in agaro carbonis fundamento tubi junctionis formantur. Post dies tres, magni asci cylindrati possunt videri. Asci stabiles sunt. Ascosporae aculeatae (1·01·7x90110 µm). Glucosum et trehalosum (exigue et variabile) fermentantur. Glucosum, sucrosum, galactosum, trehalosum, maltosum, melezitosum, methyl-
-D-glucosidum (exigue), cellobiosum, salicinum, L-sorbosum, D-xylosum, ethanolum (lente), glycerolum (exigue aut lente), xylitolum (exigue), mannitolum, glucitolum, acidum succinicum, acidum citricum, glucono-
-lactonum, acidum gluconicum (exigue aut lente), 2-ketogluconatum, N-acetylglucosaminum, et hexadecanum, at non inulinum, raffinosum, melibiosum, lactosum, amylum solubile, L-rhamnosum, L-arabinosum, D-arabinosum, D-ribosum, methanolum, 1-propanolum, 2-propanolum, 1-butanolum, erythritolum, galactitolum, ribitolum (aliquando exigue aut lente), meso-inositolum, acidum lacticum, glucosaminum (aliquando exigue), ethyl acetas (aliquando exigue) nec acetonum. Ethylaminum, lysinum et cadaverinum assimilantur at non natrium nitricum nec natrium nitrosum. Ad crescentiam vitaminae externae necessariae sunt. Augmentum in 28 °C, at non 29 °C.
Habitat Prosopeus spp. et Drosophila spp. e floribus variebus in Hawaii. Typus UWOPS 04-112.5T (h+). Allotypus UWOPS 04-109.1. In collectione zymotica Centraalbureau voor Schimmelcultures, Trajectum ad Rhenum, sub no. CBS 10058T et CBS 10057 depositae sunt.
Description of Metschnikowia kamakouana Lachance sp. nov.
Metschnikowia kamakouana (ka.ma.kou.a'na. L. nom. sing. f. adj. kamakouana of Kamakou, referring to the Kamakou Mountain rainforest, Moloka'i, where most strains of this species were recovered).
On YM agar after 3 days at 25 °C, cells are spherical to ovoidal, occur singly, in parentbud pairs or in short chains, and measure 24x36 µm. Highly refringent cells can be observed on occasion. After 2 weeks, colonies are low-convex to convex, umbonate with concentric circles, glossy to semi-glossy, white, medium to large, and butyrous. In Dalmau plate culture on Yeast Carbon Base agar after 2 weeks, pseudohyphae are formed (Fig. 1d
). After 3 days, mature asci containing two acicular ascospores (1·01·7x90110 µm) are formed in a persistent ascus that retains vestiges of the conjugated parent cells (Fig. 1c
). Fermentation: in glucose, gas production begins after 23 days and a full tube of gas develops after 56 days. Of other assimilated sugars, only trehalose was fermented weakly in some strains. Other growth test responses are given in Table 2
.
The habitat is in Prosopeus species (one strain from a Drosophila larva) associated with flowers of Ilex anomala, Broussaisia arguta and Clermontia species growing in the area of the Kamakou Preserve, Moloka'i and along the upper Hamakua ditch, Kohala Mountain, island of Hawai'i.
The type strain of M. kamakouana is strain UWOPS 04-112.5T (=CBS 10058T=NRRL Y-27836T) (h+), recovered from a specimen of Prosopeus collaris found in a flower of Clermontia kakeana. The designated allotype is strain UWOPS 04-109.1 (=CBS 10057=NRRL Y-27835) (h), recovered from a similar insectplant combination. The type locality is the area of the Kamakou Preserve, Moloka'i.
Latin diagnosis of Metschnikowia mauinuiana Lachance sp. nov.
In medio YM post dies tres cellulae singulae, binae, aut in catenis brevis, globosae aut ovoidae (24x36 µm), aliquando cum tubis longibus. Cultura in agaro malti post dies 14 infimo-convexa, tumulosa, glabra, candida et butyrosa. In agaro carbonis fundamento post dies 14 pseudomycelium formatur. Post dies unus, cellulae stirpum interfertilium mixtarum in agaro carbonis fundamento tubi junctionis formantur. Post dies tres, magni asci cylindrati possunt videri. Asci stabiles sunt. Ascosporae aculeatae (1·21·6x7080 µm). Glucosum et trehalosum (exigue) fermentantur. Glucosum, sucrosum, galactosum, trehalosum, maltosum, melezitosum, cellobiosum, salicinum, L-sorbosum, D-xylosum, ethanolum (lente), glycerolum, ribitolum (lente), xylitolum, mannitolum, glucitolum, acidum succinicum, acidum citricum, glucono-
-lactonum, acidum gluconicum (aliquando exigue aut lente), 2-ketogluconatum, glucosaminum (exigue aut lente), N-acetylglucosaminum, ethyl acetas (exigue) et hexadecanum, at non inulinum, raffinosum, melibiosum, lactosum, methyl-
-D-glucosidum, amylum solubile, L-rhamnosum, L-arabinosum, D-arabinosum, D-ribosum (aliquando exigue aut lente), methanolum, 1-propanolum, 2-propanolum, 1-butanolum, erythritolum, galactitolum, meso-inositolum, acidum lacticum (aliquando exigue), nec acetonum. Ethylaminum, lysinum et cadaverinum assimilantur at non natrium nitricum nec natrium nitrosum. Ad crescentiam vitaminae externae necessariae sunt. Augmentum in 28 °C, at non 29 °C.
Habitat Prosopeus spp. et Drosophila spp. e floribus variebus in Hawaii. Typus UWOPS 04-190.1T (h+). Allotypus UWOPS 04-110.4. In collectione zymotica Centraalbureau voor Schimmelcultures, Trajectum ad Rhenum, sub no. CBS 10060T et CBS 10059 depositae sunt.
Description of Metschnikowia mauinuiana Lachance sp. nov.
Metschnikowia mauinuiana (ma.u.i.nu.i'a.na. L. nom. sing. f. adj. mauinuiana of Maui Nui, referring to the prehistoric island of Maui Nui, now represented by the separate islands of Moloka'i, Maui, Lana'i and Kahoolawe. The known strains of this species were recovered on the former two islands).
On YM agar after 3 days at 25 °C, cells are spherical to ovoidal, occur singly, in parentbud pairs or occasionally in clumpy chains, and measure 24x36 µm. After 2 weeks, colonies are convex-umbonate to low-convex, glossy to semi-glossy, white, medium to small, and butyrous. In Dalmau plate culture on yeast carbon base agar after 2 weeks, pseudohyphae are formed (Fig. 1f
). On yeast carbon base agar at 18 °C, mixtures of cells of complementary mating types give rise to zygotes and asci after 612 h. On yeast carbon base agar at 18 °C, mixtures of cells of complementary mating types give rise to zygotes and asci after 612 h. After 3 days, mature asci containing two acicular ascospores (1·21·6x7080 µm) are formed in a persistent ascus that retains more or less conspicuous vestiges of the conjugated parent cells (Fig. 1e
). Some spores may exhibit a central swelling. Fermentation: in glucose, gas production begins after 23 days and a full tube of gas develops after 56 days. Of other assimilated sugars, only trehalose was fermented weakly. Other growth test responses are given in Table 2
.
The habitat is in Prosopeus species associated with flowers of Clermontia species growing in the area of the Kamakou Preserve, Moloka'i and in the area of the Waikamoi Preserve, Maui.
The type strain of M. mauinuiana is strain UWOPS 04-190.1T (=CBS 10060T=NRRL Y-27838T) (h+), recovered from a specimen of Prosopeus abnormalis found in a flower of Clermontia arborescens in the area of the Waikamoi Preserve, Maui. The designated allotype is strain UWOPS 04-110.4 (=CBS 10059=NRRL Y-27837) (h), recovered from a specimen of Prosopeus collaris found in a flower of Clermontia kakeana in the area of the Kamakou Preserve, Moloka'i.
Ecology
The 68 floricolous insect specimens examined in the localities listed in Table 1
yielded some 200 yeast isolates. Of these, 21 isolates belonged to the large-spored Metschnikowia clade, but none could be assigned to M. hawaiiensis, M. lochheadii, Candida ipomoeae or Candida kipukae. These four species have been isolated repeatedly (Lachance et al., 2003b
) from beetles collected on flowers of the morning glory Ipomoea indica, a native but pantropical species, in the vicinity of K
puka Puaulu, on the southern slope of Mauna Loa volcano, island of Hawai'i. During this study, 87 specimens of Prosopeus subaeneus or Conotelus mexicanus (an introduced nitidulid) collected in that region yielded 77 isolates of C. ipomoeae, 57 of M. hawaiiensis, 36 of M. lochheadii, 20 of C. kipukae and none of the species listed in Table 1
. The sharp discontinuity in the distribution of M. hawaiiensis and the sister species described here is noteworthy and may be linked in part to differences in maximum growth temperature (Table 1
).
Among other yeasts isolated in the same samples as the new species were several possibly endemic Hanseniaspora species, including some that were recently described by Cadez et al. (2003)
, the sister pair Candida oleophila and Candida railenensis and a number of undescribed species with affinities to Pichia membranifaciens, to Pichia lachancei (also a putative Hawaiian endemic) and to the smaller-spored Metschnikowia subclade. Conspicuous by their absence were members of the Wickerhamiella clade, except for rare isolates of a sister species to Candida azyma. This is in very sharp contrast to the yeast community typically associated with the beetles found in Hawaiian morning glories, where several members of the Wickerhamiella clade are common and are thought to be vectored principally by Drosophila species (Lachance et al., 2001b
).
Although exact counts were not made, a superficial correlation was perceived between the cell densities of the novel species and their frequency of recovery. This might be attributed to the short flowering season of the endemic plants compared to the nearly constant blooming of Hawaiian morning glories. Presumably, the overall yeast population increases in size with the abundance of available flowers. Climatic factors may play a role also. In the period preceding our collections, the Kamakou and Hamakua sites had experienced abundant rainfall compared to Waikamoi, Pu'u Pala and Pu'u Pili. More flowers, more beetles and larger yeast populations were found in the first two sites.
Species delineation
Table 3
shows the results of mating experiments. When mixed in compatible pairs, large-spored Metschnikowia species conjugate and give rise to zygotes within 46 h (Lachance et al., 1998a
). The zygotes are usually transformed rapidly into large asci, but the formation of ascospores, when present, is delayed for 2 days (25 °C). In the present case, strains were assigned to the same species only when compatible crosses resulted in the formation of abundant asci that contained pairs of ascospores after 3 days at 18 °C. Incubation for shorter periods or at higher temperatures gave less reliable results and prolonged incubation did not facilitate the detection of ascospores. Included for comparison were strains UWOPS 04-218.3 (=CBS 10061=NRRL Y-27839) and UWOPS 04-226.1 (=CBS 10062=NRRL Y-27840), which represent two different Metschnikowia species whose description is not possible at this time, as only one strain is available for each. The results of crosses between species ranged from no signs of reactivity in some cases, to the formation of abundant but sterile asci in others. In some cases, the asci were sufficiently rare that they might have been overlooked. However, abortive zygotes such as those produced by crosses between Metschnikowia colocasiae and relatives (Lachance & Bowles, 2004
) were not seen. Unlike what has been reported for M. borealis and Metschnikowia continentalis (Lachance et al., 1998a
), crosses between the novel species never gave rise to ascospores.
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The diversification of Hawaiian large-spored Metschnikowia species is undoubtedly linked to the isolation that follows from dispersal and subsequent founding events by their vector, the adult beetle. Factors that influence successful long-distance dispersal of the vector are primarily geological (Carlquist, 1974
). Successful founding events between islands are likely to be rare and are affected by the timing of island formation and tectonic plate movement. As a new island emerges at the plate junction, the new volcano moves with the plate (north-westerly). As a consequence, the distance between new islands depends on the tempo of volcanic activity and rate of plate movement. New islands do not become receptive to new populations until the elevation, climate and host plant populations are suitable for occupation. Founding events between areas on the same island are influenced by the same factors as those between islands. As volcanoes grow, move and merge to form a new island, the regions between the volcanoes are uninhabitable and effectively isolate the populations into different habitable zones. Even habitable zones on the same volcanic slope can be effectively separated by rivers of larva that leave pockets of vegetation (k
pukas) separated from one another. In general, insular conditions (between islands, between volcanoes and between k
pukas) are expected to favour a loss of dispersal ability and facilitate isolation of plants and animals.
This cascade of geographical and biotic factors combine to foster peripatric speciation of the yeasts and provide an ideal framework for studying and understanding diversification at a level that is not possible for continental biota. This kind of phenomenon has been documented in Hawai'i, not only for the famous picture-winged Drosophila species (Carson, 1983
), but also for other insects, spiders and plants (Coyne & Orr, 2004
). Yeasts can now be added to the list. A plausible account of speciation history would view M. hawaiiensis as the most recently derived species, as it is confined to the most volcanically active part of the Hawaiian archipelago and also the youngest [less than 0·4 million years ago (Myr); Clague & Dalrymple, 1989
]. M. hamakuensis is a likely candidate for the progenitor of M. hawaiiensis, being exclusive to the Kohala region, dated at 0·43 Myr, on the same island. M. mauinuiana would be next in line, given its broader distribution in the Maui Nui geological zone (East Maui, 0·75 Myr; Moloka'i, ca. 1·8 Myr). The remaining taxa represent more ancestral forms that could have dispersed from older islands. Appropriate exploration of the yeast community of beetles endemic to Oahu and Kauai (5·1 Myr) might reveal whether other vestigial species exist and make it possible to generate a reasonable estimate of the age of the Hawaiian clade.
More elaborate hypotheses on the putative genesis of these species would be very speculative. However, this is a rare occasion where it is appropriate to see whether certain properties of yeast species can be assigned a polarity in evolutionary time. Wickerham (1951)
, in his pioneering essay on the genus Hansenula, attempted such an exercise. He arranged the various species along lines of development, from primitive, haploid, plant-dependent and nutritionally specialized states, to advanced, diploid, free-living and nutritionally diversified states. The concept was extended to Kluyveromyces species by van der Walt (1970)
and later by Kock et al. (1988)
. However, these models have not stood the test of time, as the proposed relationships amongst Hansenula or Kluyveromyces species were not validated by sequence-based measurements of genetic relatedness (Kurtzman & Robnett, 1998
). Here, temporal polarity could be assigned to traits for which a gradient can be identified across species as a function of their evolutionary distance from M. hawaiiensis. As is the case for most Metschnikowia species, the novel species are physiologically homogeneous. In spite of this, characters that show some sort of a gradient included (Table 2
) the utilization of methyl
-D-glucoside, ethanol and glycerol, as well as growth in the presence of 50 % glucose or 15 % NaCl. For most of these, the presumed ancestral state is shared with most members of the sister clade of large-spored species found on the American continent. Maximum growth temperatures do not fit well in that scheme. Although a gradient from 26 to 33 °C is apparent along the Hawaiian species, the highest values would have been expected for the more ancestral species, given the 3537 °C observed among the continental species. As little is known on the plasticity of maximum growth temperatures in these yeasts, the subject is clearly worthy of more detailed exploration.
Strong support for peripatric speciation came from the gradient observed at the level of interfertility. An interesting mating asymmetry has been reported (Lachance et al., 1998a
; Marinoni & Lachance, 2004
), whereby crosses between M. hawaiiensis and the continental clade members give rise to some asci, but only when the h of M. hawaiiensis is mixed with a continental h+ partner. The reciprocal cross is unreactive, suggesting the existence of incompatibilities between the h+ pheromone and the h receptor site. If the Hawaiian species arose in succession, one would expect the most derived species to be fully compatible with M. hawaiiensis and the most ancestral species to mate freely with the continental species. In Table 3
, the continental subclade is represented by M. borealis although any member would do. Consistent with its proximity to M. hawaiiensis, M. hamakuensis also mated asymmetrically with M. borealis. M. mauinuiana also exhibited some asymmetry, but rare asci were seen in some crosses with M. borealis. As predicted by the peripatry model, conjugation occurred between both mating types of M. borealis and the more distant sisters of M. hawaiiensis, as well as between M. hawaiiensis and its closest relatives.
Ascus size, however, did not follow the same gradient. M. hawaiiensis forms the largest asci (up to 250 µm; Lachance et al., 1990
) and its closest relative, M. hamakuensis, the smallest (Fig. 1a
). Asci formed by the continental species have an intermediate size (Lachance et al., 1998a
, 2001a
, 2003a
), comparable to those of M. kamakouana (Fig. 1c
).
Is everything everywhere?
A simple implication of our findings is that those who are interested in microbes need not travel to exotic places to find interesting creatures to study: Most micro-organisms can be found at the local seashore or lake or, for that matter, in a garden pond.
This quote from Fenchel & Finlay (2004)
epitomises a pervasive but misleading model of microbial ecology that pictures the microbiosphere as a large Brownian soup containing a relatively small number of highly diffusible species, each ready to fill the next available niche. The ubiquitous dispersal model challenges the very existence of biogeography as a meaningful concept in microbiology. Proponents of ubiquity can be criticised, however, for an excessive reliance on the morphospecies as the unit of diversity, a tendency to extrapolate from free-living protozoa to all micro-organisms, and an anecdotal approach to assessing the relative importance of cosmopolitan versus endemic species. Here, a morphological species concept would underestimate the true number of evolutionarily significant units (biological species) by an order of magnitude. For the most part, the large-spored Metschnikowia species cannot be identified with any confidence except by their mating reactions or their DNA sequences. The diversity of these species can be explained to a great extent by historical and geographical factors. And none of these species is cosmopolitan in distribution. Our claims, however, will remain just as anecdotal as those of the ubiquity model until a systematic and reliable assessment of endemism is available for many more yeast species. Secondly, our conclusions are at present diminished by that fact that we do not yet understand the true nature of the interaction between Metschnikowia species and their vector insects. In the future, we shall attempt to elucidate both issues.
| ACKNOWLEDGEMENTS |
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N. H. Nguyen, S.-O. Suh, and M. Blackwell Five novel Candida species in insect-associated yeast clades isolated from Neuroptera and other insects. Mycologia, November 1, 2007; 99(6): 842 - 858. [Abstract] [Full Text] [PDF] |
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C. A. Rosa, M.-A. Lachance, L. C. R. S. Teixeira, R. S. Pimenta, and P. B. Morais Metschnikowia cerradonensis sp. nov., a yeast species isolated from ephemeral flowers and their nitidulid beetles in Brazil Int J Syst Evol Microbiol, January 1, 2007; 57(1): 161 - 165. [Abstract] [Full Text] [PDF] |
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M.-A. Lachance, J. M. Bowles, F. Wiens, J. Dobson, and C. P. Ewing Metschnikowia orientalis sp. nov., an Australasian yeast from nitidulid beetles. Int J Syst Evol Microbiol, October 1, 2006; 56(Pt 10): 2489 - 2493. [Abstract] [Full Text] [PDF] |
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M.-A. Lachance, T. M. Anderson, and W. T. Starmer A new subclade of haplontic Metschnikowia species associated with insects of morning glory flowers in Africa and description of Metschnikowia aberdeeniae sp. nov. Int J Syst Evol Microbiol, May 1, 2006; 56(Pt 5): 1141 - 1145. [Abstract] [Full Text] [PDF] |
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