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Int J Syst Evol Microbiol 59 (2009), 1965-1968; DOI  10.1099/ijs.0.005348-0
© 2009 International Union of Microbiological Societies

Dokdonella soli sp. nov., a gammaproteobacterium isolated from soil

Seung-Hee Yoo1, Hang-Yeon Weon2, Rangasamy Anandham3, Byung-Yong Kim1, Seung-Beom Hong1, Young-Ah Jeon1, Bon-Sung Koo1 and Soon-Wo Kwon1

1 Korean Agricultural Culture Collection (KACC), National Agrobiodiversity Center, Rural Development Administration (RDA), Suwon 441-707, Republic of Korea
2 Mushroom Research Division, National Institute of Horticultural and Medicinal Crop Science, RDA, Suwon 441-707, Republic of Korea
3 Organic Agriculture Division, National Academy of Agricultural Science, RDA, Suwon 441-707, Republic of Korea

Correspondence
Soon-Wo Kwon
swkwon{at}rda.go.kr

An aerobic, Gram-negative, yellow-coloured, rod-shaped bacterial strain, designated KIS28-6T, was isolated from soil from Ulleung, an island located in the East Sea of Korea. A phylogenetic analysis revealed that strain KIS28-6T was a member of the genus Dokdonella, having 16S rRNA gene sequence similarities of 98.1 and 96.9 % with respect to Dokdonella fugitiva CIP 108692T and Dokdonella koreensis DSM 17203T, respectively. Strain KIS28-6T showed DNA–DNA hybridization values of 38 and 32 % with respect to D. fugitiva CIP 108692T and D. koreensis DSM 17203T, respectively. The major fatty acids (>10 %) were iso-C17 : 1{omega}9c (35.7 %), iso-C17 : 0 (26.9 %) and iso-C15 : 0 (11.7 %), the major respiratory quinone was Q-8 and the DNA G+C content was 73.0 mol%. On the basis of the results obtained in this polyphasic taxonomic analysis, strain KIS28-6T represents a novel species of the genus Dokdonella, for which the name Dokdonella soli sp. nov. is proposed. The type strain is KIS28-6T (=KACC 12741T =JCM 15421T).

The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of KIS28-6T is EU685334.

A supplementary table showing the substrates utilized by strain KIS28-6T and representatives of Dokdonella species is available with the online version of this paper.






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