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Int J Syst Evol Microbiol 59 (2009), 958-963; DOI  10.1099/ijs.0.002394-0
© 2009 International Union of Microbiological Societies

Lysobacter panaciterrae sp. nov., isolated from soil of a ginseng field

Leonid N. Ten1, Hae-Min Jung2, Wan-Taek Im2, Soon-Ae Yoo1, Hee-Mock Oh3 and Sung-Taik Lee2

1 Department of Biology and Medicinal Science, Pai Chai University, 14 Yeonja-1-Gil, Seo-Gu, Daejeon 302-735, Republic of Korea
2 Department of Biological Sciences, Korea Advanced Institute of Science and Technology, 373-1, Guseong-dong, Yuseong-gu, Daejeon 305-701, Republic of Korea
3 Korean Collection for Type Cultures (KCTC), Korea Research Institute of Bioscience and Biotechnology, 52 Oeundong, Yusong-gu, Daejeon 305-333, Republic of Korea

Correspondence
Wan-Taek Im
wandra{at}kaist.ac.kr
Hee-Mock Oh
heemock{at}kribb.re.kr

A Gram-negative, aerobic, rod-shaped, non-spore-forming bacterial strain, designated Gsoil 068T, was isolated from soil of a ginseng field in Pocheon Province (South Korea), and was characterized to determine its taxonomic position by using a polyphasic approach. Comparative 16S rRNA gene sequence analysis showed that strain Gsoil 068T belonged to the family Xanthomonadaceae, class Gammaproteobacteria, and was related most closely to Lysobacter brunescens ATCC 29482T and Lysobacter gummosus ATCC 29489T (96.1 % sequence similarity). The G+C content of the genomic DNA of strain Gsoil 068T was 67.0 mol%. The detection of a quinone system with ubiquinone Q-8 as the predominant component and a fatty acid profile with iso-C15 : 0, iso-C17 : 1{omega}9c, iso-C17 : 0 and iso-C11 : 0 3-OH as the major components supported the affiliation of strain Gsoil 068T to the genus Lysobacter. On the basis of its phenotypic properties and phylogenetic distinctiveness, strain Gsoil 068T is considered to represent a novel species of the genus Lysobacter, for which the name Lysobacter panaciterrae sp. nov. is proposed. The type strain is Gsoil 068T (=KCTC 12601T =DSM 17927T).

The GenBank/EMBL/DDBJ accession number for 16S rRNA gene sequence of strain Gsoil 068T is AB245359.






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