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Int J Syst Evol Microbiol 59 (2009), 280-284; DOI  10.1099/ijs.0.002162-0
© 2009 International Union of Microbiological Societies

Nocardioides sediminis sp. nov., isolated from a sediment sample

Syed G. Dastager, Jae-Chan Lee, Yoon-Jung Ju, Dong-Jin Park and Chang-Jin Kim

Korea Research Institutes of Biosciences and Biotechnology, 52 Eoeun-dong, Yuseong gu, Daejeon 305-333, Republic of Korea

Correspondence
Chang-Jin Kim
changjin{at}kribb.re.kr

A strictly aerobic, motile, short-rod-shaped, Gram-positive-staining actinomycete strain, designated MSL-01T, was isolated from a sediment sample from Bigeum Island of Korea. 16S rRNA gene sequence analysis revealed that the isolate MSL-01T belonged to the genus Nocardioides, with the highest sequence similarity to Nocardioides terrigena DS-17T (98.54 %), but the DNA–DNA relatedness to this type strain was 34 %. The physiological properties of strain MSL-01T differ from those of Nocardioides terrigena DS-17T and other species of Nocardioides. The diamino acid in the cell-wall peptidoglycan of strain MSL-01T is LL-diaminopimelic acid, the major menaquinone is MK-8(H4) and iso-C16 : 0 is the major fatty acid component. The name Nocardioides sediminis sp. nov. is proposed for the novel species, with the type strain MSL-01T (=DSM 19263T =KCTC 19271T).

The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain MSL-01T is EF466110.




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J.-H. Yoon, S.-J. Kang, S. Park, W. Kim, and T.-K. Oh
Nocardioides caeni sp. nov., isolated from wastewater
Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2794 - 2797.
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