IJSEM Try Microbiology Online
HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
QUICK SEARCH:   [advanced]


     

This Article
Right arrow Full Text
Right arrow Full Text (PDF)
Right arrow Supplementary Figures and Table
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Right arrow Citation Map
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrow reprints & permissions
Citing Articles
Right arrow Citing Articles via CrossRef
Google Scholar
Right arrow Articles by Romanenko, L. A.
Right arrow Articles by Mikhailov, V. V.
PubMed
Right arrow PubMed Citation
Right arrow Articles by Romanenko, L. A.
Right arrow Articles by Mikhailov, V. V.
Agricola
Right arrow Articles by Romanenko, L. A.
Right arrow Articles by Mikhailov, V. V.
Int J Syst Evol Microbiol 58 (2008), 706-710; DOI  10.1099/ijs.0.65406-0
© 2008 International Union of Microbiological Societies

Pseudomonas marincola sp. nov., isolated from marine environments

Lyudmila A. Romanenko1, Masataka Uchino2, Bradley M. Tebo3, Naoto Tanaka4, Galina M. Frolova1 and Valery V. Mikhailov1

1 Pacific Institute of Bioorganic Chemistry, Far-Eastern Branch, Russian Academy of Sciences, Prospect 100 Let Vladivostoku 159, Vladivostok 690022, Russia
2 Laboratory of Food Science and Technology, Department of Applied Biology and Chemistry, Tokyo University of Agriculture, 1-1-1 Sakuragaoka, Setagaya-ku, Tokyo 156-8502, Japan
3 Department of Environmental & Biomolecular Systems, OGI School of Science & Engineering, Oregon Health & Science University, 20000 NW Walker Road, Beaverton, OR 97006, USA
4 NODAI Culture Collection Center, Tokyo University of Agriculture, 1-1-1 Sakuragaoka, Setagaya-ku, Tokyo 156-8502, Japan

Correspondence
Lyudmila A. Romanenko
lro{at}piboc.dvo.ru

An aerobic, Gram-negative, motile, non-pigmented bacterium, strain KMM 3042T, isolated from a deep-sea brittle star in the Fiji Sea, was subjected to a polyphasic taxonomic study. Phylogenetic analysis based on 16S rRNA gene sequences revealed marine Mn(II)-oxidizing isolate S185-2B as the closest neighbour of strain KMM 3042T (99.9 % sequence similarity). The two strains formed a distinct lineage within the genus Pseudomonas adjacent to the members of the Pseudomonas borbori cluster, sharing highest sequence similarity of 97.4 and 97.0 %, respectively, with P. borbori DSM 17834T and Pseudomonas flavescens DSM 12071T. The DNA–DNA hybridization value (71 %) between strains KMM 3042T and S185-2B confirmed their assignment to the same species. On the basis of phylogenetic analysis, DNA–DNA hybridization and physiological and biochemical characterization, strains KMM 3042T and S185-2B should be assigned to a novel species of the genus Pseudomonas, for which the name Pseudomonas marincola sp. nov. is proposed. The type strain is KMM 3042T (=NRIC 0729T =JCM 14761T).

The GenBank/EMBL/DDBJ accession numbers for the 16S rRNA gene sequences of strains KMM 3042T and S185-2B are AB301071 and AF326382, respectively.

Thin-layer chromatograms of polar lipids, a maximum-likelihood tree and detailed fatty acid profiles are available as supplementary material with the online version of this paper.






HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
INT J SYST EVOL MICROBIOL MICROBIOLOGY J GEN VIROL
J MED MICROBIOL ALL SGM JOURNALS
Copyright © 2008 by the International Union of Microbiological Societies.