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Int J Syst Evol Microbiol 57 (2007), 1131-1136; DOI  10.1099/ijs.0.64966-0
© 2007 International Union of Microbiological Societies

Lysobacter defluvii sp. nov., isolated from municipal solid waste

A. F. Yassin1, Wen-Ming Chen2, H. Hupfer3, C. Siering3, R. M. Kroppenstedt4, A. B. Arun5, Wei-An Lai5, Fo-Ting Shen5, P. D. Rekha5 and Chiu Chung Young5

1 Institut für Medizinische Mikrobiologie und Immunologie der Universität Bonn, 53127 Bonn, Germany
2 Laboratory of Microbiology, Department of Seafood Science, National Kaohsiung Institute of Marine Technology, Nan-Tzu, Kaohsiung 811, Taiwan, ROC
3 Kekulé-Institut für Organische Chemie und Biochemie der Universität Bonn, 53121 Bonn, Germany
4 DSMZ – Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH, Mascheroder Inhoffenstraße 7b, D-38124 Braunschweig, Germany
5 College of Agriculture and Natural Resources, Department of Soil and Environmental Sciences, National Chung Hsing University, Taichung 402, Taiwan, ROC

Correspondence
A. F. Yassin
yassin{at}mibi03.meb.uni-bonn.de

A bacterial isolate obtained from soil from a municipal landfill site in India was characterized using a polyphasic taxonomic approach. The colonies of the isolate were found to be yellow and highly mucoid. Comparative analysis of the 16S rRNA gene sequence showed that this isolate constitutes a distinct phyletic line within the genus Lysobacter, displaying >3 % sequence divergence with respect to recognized Lysobacter species. The generic assignment was confirmed by chemotaxonomic data, which revealed the presence of a fatty acid profile characteristic of members of the genus Lysobacter and consisting of saturated, unsaturated, straight-chain and branched-chain fatty acids as well as iso-C11 : 0 3-OH as hydroxylated fatty acid, and the presence of an ubiquinone with eight isoprene units (Q-8) as the predominant respiratory quinone. The genotypic and phenotypic data show that strain IMMIB APB-9T merits classification as representing a novel species of the genus Lysobacter, for which the name Lysobacter defluvii sp. nov. is proposed. The type strain is IMMIB APB-9T (=CCUG 53152T=DSM 18482T).


The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain IMMIB APB-9T is AM283465.




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