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Int J Syst Evol Microbiol 57 (2007), 646-649; DOI  10.1099/ijs.0.64427-0
© 2007 International Union of Microbiological Societies

Pseudoxanthomonas yeongjuensis sp. nov., isolated from soil cultivated with Korean ginseng

Seung-Hee Yoo1, Hang-Yeon Weon2, Byung-Yong Kim1, Jin-Ho Kim3, Youn-Kyung Baek1, Soon-Wo Kwon1, Seung-Joo Go1 and Erko Stackebrandt4

1 Korean Agricultural Culture Collection (KACC), Microbial Genetics Division, National Institute of Agricultural Biotechnology, Rural Development Administration, Suwon 441-707, Korea
2 Applied Microbiology Division, National Institute of Agricultural Science and Technology, Rural Development Administration, Suwon 441-707, Korea
3 Division of Environment and Ecology, National Institute of Agricultural Science and Technology, Rural Development Administration, Suwon 441-707, Korea
4 Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH, Inhoffenstrasse 7b, D-38124 Braunschweig, Germany

Correspondence
Soon-Wo Kwon
swkwon{at}rda.go.kr

A Gram-negative, strictly aerobic, non-spore-forming bacterium, motile by means of single polar flagellum and rod-shaped, designated strain GR12-1T, was isolated from soil of a ginseng field in Yeongju region, Korea. Phylogenetic analysis based on 16S rRNA gene sequences indicated that this strain is related to members of the genus Pseudoxanthomonas, showing sequence similarity values ranged from 92.3 to 96.2 %. This organism grew at 5–33 °C, with optimum growth at 28 °C. Strain GR12-1T grew optimally in the presence of 0–2 % NaCl. The whole-cell fatty acid profile included iso-C15 : 0, iso-C17 : 1{omega}9c, iso-C16 : 0, iso-C11 : 0 3-OH and iso-C17 : 0 as major components. The only isoprenoid quinone was ubiquinone 8 (Q-8). The DNA G+C content was 63.4 mol%. On the basis of phenotypic, genetic and phylogenetic data, strain GR12-1T should be classified as a member of a novel species of the genus Pseudoxanthomonas, for which the name Pseudoxanthomonas yeongjuensis sp. nov. is proposed, with strain GR12-1T (=KACC 11580T=DSM 18204T) as the type strain.

The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain GR12-1T is DQ438977.

Details of the fatty acid composition of strain GR12-1T and related strains are available as supplementary material in IJSEM Online.




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C. C. Young, M.-J. Ho, A. B. Arun, W.-M. Chen, W.-A. Lai, F.-T. Shen, P. D. Rekha, and A. F. Yassin
Pseudoxanthomonas spadix sp. nov., isolated from oil-contaminated soil
Int J Syst Evol Microbiol, August 1, 2007; 57(8): 1823 - 1827.
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