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Int J Syst Evol Microbiol 57 (2007), 639-645; DOI  10.1099/ijs.0.64771-0
© 2007 International Union of Microbiological Societies

Deefgea rivuli gen. nov., sp. nov., a member of the class Betaproteobacteria

Erko Stackebrandt1, Elke Lang1, Sylvie Cousin1, Orsola Päuker1, Evelyne Brambilla1, Reiner Kroppenstedt1 and Heinrich Lünsdorf2

1 DSMZ – German Collection of Microorganisms and Cell Cultures GmbH, Inhoffenstr. 7b, 38124 Braunschweig, Germany
2 Helmholtz Centre for Infection Research, Inhoffenstr. 7, 38124 Braunschweig, Germany

Correspondence
Erko Stackebrandt
erko{at}dsmz.de

Two strains, designated WB 3.4-79T and WB 3.3-25, were isolated from a hard-water sample collected from the Westerhöfer Bach, Lower Saxony, Germany. The strains shared 100 % DNA–DNA relatedness, indicating membership of the same genospecies. This close relationship was supported by identical 16S rRNA gene sequences and high similarities in fatty acid composition and biochemical characteristics. The G+C content of the genomic DNA of strain WB 3.4-79T was 48.5 mol% and the predominant ubiquinone was Q-8. Major polar lipids were phosphatidylethanolamine and phosphatidylglycerol. Major fatty acids (>10 %) were C16 : 0 and C16 : 1{omega}7c. Polyhydroxybutyrate and polyphosphate granules as well as unidentified enterosomes and a polar organelle are visible by electron microscopy. Comparative 16S rRNA gene sequence analysis indicated that the isolates were placed within the class Betaproteobacteria, remotely related to Chitinibacter tainanensis DSM 15459T, Silvimonas terrae KCTC 12358T, Formivibrio citricus DSM 6150T and Iodobacter fluviatilis DSM 3764T. On the basis of phylogenetic and phenotypic distinctness, we propose a novel genus, Deefgea gen. nov., with Deefgea rivuli sp. nov. as the type species. The type strain of Deefgea rivuli is strain WB 3.4-79T (=DSM 18356T=CIP 109326T).


Abbreviations: EELS, electron energy loss spectroscopy

The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain WB 3.4-79T is AM397080.

Results of EELS and a 16S rRNA gene sequence-based maximum-likelihood tree are available as supplementary material in IJSEM Online.




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