IJSEM Faster Access from Outside North America
HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
 QUICK SEARCH:   [advanced]


     


This Article
Right arrow Full Text
Right arrow Full Text (PDF)
Right arrow Supplementary Tables
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Right arrow Citation Map
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrow reprints & permissions
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via CrossRef
Google Scholar
Right arrow Articles by Urbanczyk, H.
Right arrow Articles by Dunlap, P. V.
PubMed
Right arrow PubMed Citation
Right arrow Articles by Urbanczyk, H.
Right arrow Articles by Dunlap, P. V.
Agricola
Right arrow Articles by Urbanczyk, H.
Right arrow Articles by Dunlap, P. V.
Int J Syst Evol Microbiol 57 (2007), 2823-2829; DOI  10.1099/ijs.0.65081-0
© 2007 International Union of Microbiological Societies

Reclassification of Vibrio fischeri, Vibrio logei, Vibrio salmonicida and Vibrio wodanis as Aliivibrio fischeri gen. nov., comb. nov., Aliivibrio logei comb. nov., Aliivibrio salmonicida comb. nov. and Aliivibrio wodanis comb. nov.

Henryk Urbanczyk1, Jennifer C. Ast1, Melissa J. Higgins2, Jeremy Carson2 and Paul V. Dunlap1

1 Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI 48109-1048, USA
2 The Tasmanian Aquaculture and Fisheries Institute, University of Tasmania, Launceston, Tasmania, Australia

Correspondence
Paul V. Dunlap
pvdunlap{at}umich.edu

Four closely related species, Vibrio fischeri, Vibrio logei, Vibrio salmonicida and Vibrio wodanis, form a clade within the family Vibrionaceae; the taxonomic status and phylogenetic position of this clade have remained ambiguous for many years. To resolve this ambiguity, we tested these species against other species of the Vibrionaceae for phylogenetic and phenotypic differences. Sequence identities for the 16S rRNA gene were ≥97.4 % among members of the V. fischeri group, but were ≤95.5 % for members of this group in comparison with type species of other genera of the Vibrionaceae (i.e. Photobacterium and Vibrio, with which they overlap in G+C content, and Enterovibrio, Grimontia and Salinivibrio, with which they do not overlap in G+C content). Combined analysis of the recA, rpoA, pyrH, gyrB and 16S rRNA gene sequences revealed that the species of the V. fischeri group form a tightly clustered clade, distinct from these other genera. Furthermore, phenotypic traits differentiated the V. fischeri group from other genera of the Vibrionaceae, and a panel of 13 biochemical tests discriminated members of the V. fischeri group from type strains of Photobacterium and Vibrio. These results indicate that the four species of the V. fischeri group represent a lineage within the Vibrionaceae that is distinct from other genera. We therefore propose their reclassification in a new genus, Aliivibrio gen. nov. Aliivibrio is composed of four species: Aliivibrio fischeri comb. nov. (the type species) (type strain ATCC 7744T =CAIM 329T =CCUG 13450T =CIP 103206T =DSM 507T =LMG 4414T =NCIMB 1281T), Aliivibrio logei comb. nov. (type strain ATCC 29985T =CCUG 20283T =CIP 104991T =NCIMB 2252T), Aliivibrio salmonicida comb. nov. (type strain ATCC 43839T =CIP 103166T =LMG 14010T =NCIMB 2262T) and Aliivibrio wodanis comb. nov. (type strain ATCC BAA-104T =NCIMB 13582T =LMG 24053T).


The GenBank/EMBL/DDBJ accession numbers for the sequences obtained in this study are EF380230–EF380261, EF667054 and EF667055, as detailed in Fig. 1.

GenBank accession numbers for 16S rRNA gene sequences and a table with complete phenotyping data are available as supplementary material with the online version of this paper.




This article has been cited by other articles:


Home page
J. Bacteriol.Home page
H. Urbanczyk, J. C. Ast, A. J. Kaeding, J. D. Oliver, and P. V. Dunlap
Phylogenetic Analysis of the Incidence of lux Gene Horizontal Transfer in Vibrionaceae
J. Bacteriol., May 15, 2008; 190(10): 3494 - 3504.
[Abstract] [Full Text] [PDF]




HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
INT J SYST EVOL MICROBIOL MICROBIOLOGY J GEN VIROL
J MED MICROBIOL ALL SGM JOURNALS
Copyright © 2007 by the International Union of Microbiological Societies.