|
|
||||||||
Department of Biological Sciences, Korea Advanced Institute of Science and Technology (KAIST), Guseong-dong 373-1, Yuseong-gu, Daejeon 305-701, Republic of Korea
Correspondence
Sung-Taik Lee
e_stlee{at}kaist.ac.kr
The taxonomic position of a novel bacterial strain, Ch06T, isolated from an upflow anaerobic sludge blanket reactor was determined. Strain Ch06T was Gram-negative, aerobic, motile and oxidase- and catalase-positive. A comparative 16S rRNA gene sequence analysis showed a clear affiliation of strain Ch06T to the Alphaproteobacteria and it was most closely related to Zoogloea ramigera ATCC 19623 and Mycoplana dimorpha IAM 13154T (97·9 and 96·3 % sequence similarity, respectively). The major respiratory quinone was Q-10 and the predominant fatty acids were C16 : 0, 3-OH C16 : 0, C18 : 0, C19 : 0 cyclo
8c and summed feature 7 (C18 : 1
7c/
9t/
12t, C18 : 1
7c/
9c/
12t). On the basis of phenotypic, chemotaxonomic and phylogenetic characteristics, the novel isolate was assigned to a new genus, Shinella gen. nov., as Shinella granuli gen. nov., sp. nov. (type strain Ch06T=KCTC 12237T=JCM 13254T). It is proposed that Zoogloea ramigera ATCC 19623 is reclassified into the novel genus Shinella as Shinella zoogloeoides sp. nov. (type strain ATCC 19623T=IAM 12669T=I-16-MT).
Published online ahead of print on 21 October 2005 as DOI 10.1099/ijs.0.63942-0.
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain Ch06T is AY995149.
This article has been cited by other articles:
![]() |
I. Vaz-Moreira, C. Faria, A. R. Lopes, L. A. Svensson, E. R. B. Moore, O. C. Nunes, and C. M. Manaia Shinella fusca sp. nov., isolated from domestic waste compost Int J Syst Evol Microbiol, January 1, 2010; 60(1): 144 - 148. [Abstract] [Full Text] [PDF] |
||||
![]() |
T. Matsui, N. Shinzato, H. Tamaki, M. Muramatsu, and S. Hanada Shinella yambaruensis sp. nov., a 3-methyl-sulfolane-assimilating bacterium isolated from soil Int J Syst Evol Microbiol, March 1, 2009; 59(3): 536 - 539. [Abstract] [Full Text] [PDF] |
||||
![]() |
J. R. Cole, Q. Wang, E. Cardenas, J. Fish, B. Chai, R. J. Farris, A. S. Kulam-Syed-Mohideen, D. M. McGarrell, T. Marsh, G. M. Garrity, et al. The Ribosomal Database Project: improved alignments and new tools for rRNA analysis Nucleic Acids Res., January 1, 2009; 37(suppl_1): D141 - D145. [Abstract] [Full Text] [PDF] |
||||
![]() |
S. Krishnamurthi and T. Chakrabarti Proposal for transfer of Pelagibacillus goriensis Kim et al. 2007 to the genus Terribacillus as Terribacillus goriensis comb. nov. Int J Syst Evol Microbiol, October 1, 2008; 58(10): 2287 - 2291. [Abstract] [Full Text] [PDF] |
||||
![]() |
D. X. Lin, E. T. Wang, H. Tang, T. X. Han, Y. R. He, S. H. Guan, and W. X. Chen Shinella kummerowiae sp. nov., a symbiotic bacterium isolated from root nodules of the herbal legume Kummerowia stipulacea Int J Syst Evol Microbiol, June 1, 2008; 58(6): 1409 - 1413. [Abstract] [Full Text] [PDF] |
||||
![]() |
H.-W. Lee, H.-S. Yu, Q.-m. Liu, H.-M. Jung, D.-S. An, W.-T. Im, F.-X. Jin, and S.-T. Lee Kaistia granuli sp. nov., isolated from anaerobic granules in an upflow anaerobic sludge blanket reactor Int J Syst Evol Microbiol, October 1, 2007; 57(10): 2280 - 2283. [Abstract] [Full Text] [PDF] |
||||
![]() |
W.-T. Im, Z. Aslam, M. Lee, L. N. Ten, D.-C. Yang, and S.-T. Lee Starkeya koreensis sp. nov., isolated from rice straw. Int J Syst Evol Microbiol, October 1, 2006; 56(Pt 10): 2409 - 2414. [Abstract] [Full Text] [PDF] |
||||
| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |
| INT J SYST EVOL MICROBIOL | MICROBIOLOGY | J GEN VIROL |
| J MED MICROBIOL | ALL SGM JOURNALS | |