IJSEM Faster Access from Outside North America
HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
 QUICK SEARCH:   [advanced]


     


This Article
Right arrow Full Text
Right arrow Full Text (PDF)
Right arrow Supplementary phylogenetic tree
Right arrow Erratum
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Right arrow Citation Map
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrow reprints & permissions
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via CrossRef
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Sekiguchi, Y.
Right arrow Articles by Kamagata, Y.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Sekiguchi, Y.
Right arrow Articles by Kamagata, Y.
Agricola
Right arrow Articles by Sekiguchi, Y.
Right arrow Articles by Kamagata, Y.
Int J Syst Evol Microbiol 53 (2003), 1843-1851; DOI  10.1099/ijs.0.02699-0
© 2003 International Union of Microbiological Societies

Anaerolinea thermophila gen. nov., sp. nov. and Caldilinea aerophila gen. nov., sp. nov., novel filamentous thermophiles that represent a previously uncultured lineage of the domain Bacteria at the subphylum level

Yuji Sekiguchi1, Takeshi Yamada2, Satoshi Hanada1, Akiyoshi Ohashi2, Hideki Harada2 and Yoichi Kamagata1

1 Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology (AIST), Central 6, 1-1-1 Higashi, Tsukuba, Ibaraki 305-8566, Japan
2 Department of Environmental Systems Engineering, Nagaoka University of Technology, 1603-1 Kamitomioka, Nagaoka, Niigata 940-2188, Japan

Correspondence
Yuji Sekiguchi
y.sekiguchi{at}aist.go.jp

Two thermophilic, Gram-negative, non-spore-forming, multicellular filamentous micro-organisms were isolated from thermophilic granular sludge in an upflow anaerobic sludge blanket reactor treating fried soybean-curd manufacturing waste water (strain UNI-1T) and from a hot spring sulfur-turf in Japan (strain STL-6-O1T). The filaments were longer than 100 µm and of 0·2–0·3 µm (strain UNI-1T) or 0·7–0·8 µm (strain STL-6-O1T) in width. Strain UNI-1T was a strictly anaerobic organism. The optimum temperature for growth was around 55 °C; growth occurred in the range 50–60 °C. The optimum pH for growth was around 7·0; growth occurred in the range pH 6·0–8·0. Strain STL-6-O1T was a facultatively aerobic bacterium. The optimum temperature for growth was around 55 °C; growth occurred in the range 37–65 °C. The optimum pH for growth was around 7·5–8·0; growth occurred in the range pH 7·0–9·0. The two organisms grew chemo-organotrophically on a number of carbohydrates and amino acids in the presence of yeast extract. The G+C content of the DNA of strains UNI-1T and STL-6-O1T was 54·5 and 59·0 mol%, respectively. Major cellular fatty acids for strain UNI-1T were C16 : 0, C15 : 0, C14 : 0 and C18 : 0, whereas those for strain STL-6-O1T were C18 : 0, C16 : 0, C17 : 0 and iso-C17 : 0. MK-10 was the major quinone from aerobically grown STL-6-O1T cells. Phylogenetic analyses based on 16S rDNA sequences revealed that both strains belong to an uncultured, previously recognized clone lineage of the phylum Chloroflexi (formerly known as green non-sulfur bacteria). These phenotypic and genetic properties suggested that each strain should be classified into a new independent genus; hence, the names Anaerolinea thermophila and Caldilinea aerophila are proposed for strains UNI-1T (=JCM 11387T=DSM 14523T) and STL-6-O1T(=JCM 11388T=DSM 14525T), respectively. These strains represent the type and sole species of the genera Anaerolinea and Caldilinea, respectively.


Abbreviations: NTA, nitrilotriacetate; PCE, tetrachloroethene; TCE, trichloroethene

Published online ahead of print on 23 May 2003 as DOI 10.1099/ijs.0.02699-0.

The GenBank/EMBL/DDBJ accession numbers for the 16S rDNA sequences of Anaerolinea thermophila UNI-1T and Caldilinea aerophila STL-6-O1T are AB046413 and AB067647, respectively.

A phylogenetic tree (constructed using a large dataset) showing the relationships of A. thermophila UNI-1T and C. aerophila STL-6-O1T with members of the phylum Chloroflexi is available in IJSEM Online.




This article has been cited by other articles:


Home page
Int. J. Syst. Evol. Microbiol.Home page
S. Sakai, H. Imachi, S. Hanada, A. Ohashi, H. Harada, and Y. Kamagata
Methanocella paludicola gen. nov., sp. nov., a methane-producing archaeon, the first isolate of the lineage 'Rice Cluster I', and proposal of the new archaeal order Methanocellales ord. nov.
Int J Syst Evol Microbiol, April 1, 2008; 58(4): 929 - 936.
[Abstract] [Full Text] [PDF]


Home page
Ann. N. Y. Acad. Sci.Home page
I. D. WAGNER and J. WIEGEL
Diversity of Thermophilic Anaerobes
Ann. N.Y. Acad. Sci., March 1, 2008; 1125(1): 1 - 43.
[Abstract] [Full Text] [PDF]


Home page
Int. J. Syst. Evol. Microbiol.Home page
T. Yamada, H. Imachi, A. Ohashi, H. Harada, S. Hanada, Y. Kamagata, and Y. Sekiguchi
Bellilinea caldifistulae gen. nov., sp. nov. and Longilinea arvoryzae gen. nov., sp. nov., strictly anaerobic, filamentous bacteria of the phylum Chloroflexi isolated from methanogenic propionate-degrading consortia
Int J Syst Evol Microbiol, October 1, 2007; 57(10): 2299 - 2306.
[Abstract] [Full Text] [PDF]


Home page
Int. J. Syst. Evol. Microbiol.Home page
Y. Sekiguchi, H. Imachi, A. Susilorukmi, M. Muramatsu, A. Ohashi, H. Harada, S. Hanada, and Y. Kamagata
Tepidanaerobacter syntrophicus gen. nov., sp. nov., an anaerobic, moderately thermophilic, syntrophic alcohol- and lactate-degrading bacterium isolated from thermophilic digested sludges.
Int J Syst Evol Microbiol, July 1, 2006; 56(Pt 7): 1621 - 1629.
[Abstract] [Full Text] [PDF]


Home page
Appl. Environ. Microbiol.Home page
L. Cavaletti, P. Monciardini, R. Bamonte, P. Schumann, M. Rohde, M. Sosio, and S. Donadio
New lineage of filamentous, spore-forming, gram-positive bacteria from soil.
Appl. Envir. Microbiol., June 1, 2006; 72(6): 4360 - 4369.
[Abstract] [Full Text] [PDF]


Home page
Int. J. Syst. Evol. Microbiol.Home page
T. Yamada, Y. Sekiguchi, S. Hanada, H. Imachi, A. Ohashi, H. Harada, and Y. Kamagata
Anaerolinea thermolimosa sp. nov., Levilinea saccharolytica gen. nov., sp. nov. and Leptolinea tardivitalis gen. nov., sp. nov., novel filamentous anaerobes, and description of the new classes Anaerolineae classis nov. and Caldilineae classis nov. in the bacterial phylum Chloroflexi
Int J Syst Evol Microbiol, June 1, 2006; 56(6): 1331 - 1340.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
F. Inagaki, T. Nunoura, S. Nakagawa, A. Teske, M. Lever, A. Lauer, M. Suzuki, K. Takai, M. Delwiche, F. S. Colwell, et al.
Biogeographical distribution and diversity of microbes in methane hydrate-bearing deep marine sediments on the Pacific Ocean Margin
PNAS, February 21, 2006; 103(8): 2815 - 2820.
[Abstract] [Full Text] [PDF]


Home page
Appl. Environ. Microbiol.Home page
H. Kimura, M. Sugihara, K. Kato, and S. Hanada
Selective Phylogenetic Analysis Targeted at 16S rRNA Genes of Thermophiles and Hyperthermophiles in Deep-Subsurface Geothermal Environments
Appl. Envir. Microbiol., January 1, 2006; 72(1): 21 - 27.
[Abstract] [Full Text] [PDF]


Home page
Appl. Environ. Microbiol.Home page
D. C. White, R. Geyer, A. D. Peacock, D. B. Hedrick, S. S. Koenigsberg, Y. Sung, J. He, and F. E. Loffler
Phospholipid Furan Fatty Acids and Ubiquinone-8: Lipid Biomarkers That May Protect Dehalococcoides Strains from Free Radicals
Appl. Envir. Microbiol., December 1, 2005; 71(12): 8426 - 8433.
[Abstract] [Full Text] [PDF]


Home page
Appl. Environ. Microbiol.Home page
T. Yamada, Y. Sekiguchi, H. Imachi, Y. Kamagata, A. Ohashi, and H. Harada
Diversity, Localization, and Physiological Properties of Filamentous Microbes Belonging to Chloroflexi Subphylum I in Mesophilic and Thermophilic Methanogenic Sludge Granules
Appl. Envir. Microbiol., November 1, 2005; 71(11): 7493 - 7503.
[Abstract] [Full Text] [PDF]


Home page
Appl. Environ. Microbiol.Home page
S. Okabe, T. Kindaichi, and T. Ito
Fate of 14C-Labeled Microbial Products Derived from Nitrifying Bacteria in Autotrophic Nitrifying Biofilms
Appl. Envir. Microbiol., July 1, 2005; 71(7): 3987 - 3994.
[Abstract] [Full Text] [PDF]


Home page
Int. J. Syst. Evol. Microbiol.Home page
P. Hugenholtz and E. Stackebrandt
Reclassification of Sphaerobacter thermophilus from the subclass Sphaerobacteridae in the phylum Actinobacteria to the class Thermomicrobia (emended description) in the phylum Chloroflexi (emended description)
Int J Syst Evol Microbiol, November 1, 2004; 54(6): 2049 - 2051.
[Abstract] [Full Text] [PDF]


Home page
Appl. Environ. Microbiol.Home page
Y. Koizumi, H. Kojima, and M. Fukui
Dominant Microbial Composition and Its Vertical Distribution in Saline Meromictic Lake Kaiike (Japan) as Revealed by Quantitative Oligonucleotide Probe Membrane Hybridization
Appl. Envir. Microbiol., August 1, 2004; 70(8): 4930 - 4940.
[Abstract] [Full Text] [PDF]




HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
INT J SYST EVOL MICROBIOL MICROBIOLOGY J GEN VIROL
J MED MICROBIOL ALL SGM JOURNALS
Copyright © 2003 by the International Union of Microbiological Societies.