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Int J Syst Evol Microbiol 53 (2003), 1261-1269; DOI  10.1099/ijs.0.02491-0
© 2003 International Union of Microbiological Societies

Silicibacter pomeroyi sp. nov. and Roseovarius nubinhibens sp. nov., dimethylsulfoniopropionate-demethylating bacteria from marine environments

José M. González1, Joseph S. Covert2, William B. Whitman3, James R. Henriksen3, Frank Mayer4, Birgit Scharf5, Rüdiger Schmitt5, Alison Buchan2, Jed A. Fuhrman6, Ronald P. Kiene7 and Mary Ann Moran2

1 Departamento de Microbiología y Biología Celular, Facultad de Farmacia, Universidad de La Laguna, 38071 La Laguna, Tenerife, Spain
2 Departments of Marine Sciences, University of Georgia, Athens, GA 30602, USA
3 Departments of Microbiology, University of Georgia, Athens, GA 30602, USA
4 Institüt für Mikrobiologie, Universität Göttingen, 37077 Göttingen, Germany
5 Institüt für Biochemie, Genetik und Mikrobiologie, Universität Regensburg, D-93040 Regensburg, Germany
6 Department of Biological Sciences, University of Southern California, Los Angeles, CA 90089, USA
7 Department of Marine Sciences, University of South Alabama, Mobile, AL 36688, USA

Correspondence
Mary Ann Moran
mmoran{at}uga.edu

Three Gram-negative, rod-shaped, aerobic bacteria that were capable of degrading dimethylsulfoniopropionate (DMSP) were isolated from marine waters. These isolates (DSS-3T, DSS-10 and ISMT) exhibited the ability to demethylate and cleave DMSP, as well as to degrade other sulfur compounds related to DMSP that are cycled in marine environments. Intracellular poly-{beta}-hydroxybutyrate inclusions, surface blebs and one polar, complex flagellum that rotated exclusively in the clockwise direction were observed for DSS-3T. The outer membrane of ISMT was separated from the cytoplasm at the poles in a toga-like morphology. The primary fatty acid in both strains was C18 : 1{omega}7c. DNA G+C contents for the isolates were 68·0±0·1, 68·1±0·1 and 66·0±0·2 mol% for DSS-3T, DSS-10 and ISMT, respectively. 16S rRNA gene sequence analyses placed these organisms within the Roseobacter lineage of the {alpha}-Proteobacteria. Closely related species were Silicibacter lacuscaerulensis and Ruegeria atlantica (DSS-3T and DSS-10) and Roseovarius tolerans (ISMT). Neither DSS-3T nor ISMT exhibited 16S rRNA similarity >97 % or DNA–DNA hybridization values >45 % to their nearest described relatives. Genotypic and phenotypic analyses support the creation of two novel species: Silicibacter pomeroyi sp. nov. with strain DSS-3T (=ATCC 700808T=DSM 15171T) as the type strain, and Roseovarius nubinhibens sp. nov. with strain ISMT (=ATCC BAA-591T=DSM 15170T) as the type strain.


Abbreviations: DMS, dimethylsulfide; DMSP, dimethylsulfoniopropionate;; ITS, internal transcribed spacer; MeSH, methanethiol; PHB, poly-{beta}-hydroxybutyrate

Published online ahead of print on 7 February 2003 as DOI 10.1099/ijs.0.02491-0.

The GenBank/EMBL/DDBJ accession numbers for the 16S rDNA sequences of strains DSS-10, DSS-3T and ISMT are AF434674, AF098491 and AF098495, respectively.




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