|
|
||||||||
-Proteobacteria
Department of Microbiology, Oregon State University, Corvallis, OR 97331, USA
Correspondence
Stephen J. Giovannoni
steve.giovannoni{at}orst.edu
Two bacterial strains, HTCC2503T and HTCC2517, were isolated from the Bermuda Atlantic Time Series Station in the western Sargasso Sea, Atlantic Ocean, by new high-throughput culture methods that rely on dilution to extinction in very-low-nutrient media. Characterization of the two strains by polyphasic approaches revealed that they belonged to the same species. These isolates are Gram-negative, strictly aerobic, chemoheterotrophic, slightly motile short rods with a single flagellum. The temperature, pH and NaCl concentration ranges for growth were 1037 °C, 6·09·0 and 0·7520 % (w/v), respectively. Colonies on marine agar were very small (0·30·8 mm in diameter), yellowish-brown and very hard. Carotenoid pigments were synthesized but bacteriochlorophyll a was not. Several kinds of pentose, hexose, sugar alcohol, oligosaccharide and amino acid were utilized as sole carbon sources. Oxidase was produced, but catalase was not. All cellular fatty acids were even-numbered monounsaturated or saturated fatty acids and the major fatty acid was cis-7-octadecenoic acid (73·3 %). The DNA G+C content of strain HTCC2503T was 60·8 mol%. Phylogenetic analyses of 16S rRNA gene sequences clearly indicated that the strains formed a distinct lineage, allied with activated sludge environmental clone H9, in the
-Proteobacteria. The clade containing strains HTCC2503T and HTCC2517 and clone H9 could not be phylogenetically associated with any of the six known orders of the
-Proteobacteria. From this polyphasic evidence, it is proposed that the novel strains should be classified as Parvularcula bermudensis gen. nov., sp. nov. The type strain is HTCC2503T (=ATCC BAA-594T =KCTC 12087T) and the reference strain is HTCC2517.
Published online ahead of print on 29 November 2002 as DOI 10.1099/ijs.0.02566-0.
The GenBank accession numbers for the 16S rRNA gene sequences of strains HTCC2503T and HTCC2517 are AF544015 and AF544016, respectively.
This article has been cited by other articles:
![]() |
H.-M. Oh, K. Lee, and J.-C. Cho Lewinella antarctica sp. nov., a marine bacterium isolated from Antarctic seawater Int J Syst Evol Microbiol, January 1, 2009; 59(1): 65 - 68. [Abstract] [Full Text] [PDF] |
||||
![]() |
K. Lee, H. K. Lee, and J.-C. Cho Hahella antarctica sp. nov., isolated from Antarctic seawater Int J Syst Evol Microbiol, February 1, 2008; 58(2): 353 - 356. [Abstract] [Full Text] [PDF] |
||||
![]() |
J. Song, Y.-J. Choo, and J.-C. Cho Perlucidibaca piscinae gen. nov., sp. nov., a freshwater bacterium belonging to the family Moraxellaceae Int J Syst Evol Microbiol, January 1, 2008; 58(1): 97 - 102. [Abstract] [Full Text] [PDF] |
||||
![]() |
K. Lee, H. K. Lee, T.-H. Choi, and J.-C. Cho Sejongia marina sp. nov., isolated from Antarctic seawater Int J Syst Evol Microbiol, December 1, 2007; 57(12): 2917 - 2921. [Abstract] [Full Text] [PDF] |
||||
![]() |
T.-H. Choi, H. K. Lee, K. Lee, and J.-C. Cho Ulvibacter antarcticus sp. nov., isolated from Antarctic coastal seawater Int J Syst Evol Microbiol, December 1, 2007; 57(12): 2922 - 2925. [Abstract] [Full Text] [PDF] |
||||
![]() |
K. Lee, H. K. Lee, T.-H. Choi, and J.-C. Cho Robiginitomaculum antarcticum gen. nov., sp. nov., a member of the family Hyphomonadaceae, from Antarctic seawater Int J Syst Evol Microbiol, November 1, 2007; 57(11): 2595 - 2599. [Abstract] [Full Text] [PDF] |
||||
![]() |
B. Guo, J. Gu, Y.-G. Ye, Y.-Q. Tang, K. Kida, and X.-L. Wu Marinobacter segnicrescens sp. nov., a moderate halophile isolated from benthic sediment of the South China Sea Int J Syst Evol Microbiol, September 1, 2007; 57(9): 1970 - 1974. [Abstract] [Full Text] [PDF] |
||||
![]() |
J. Song and J.-C. Cho Methylibium aquaticum sp. nov., a betaproteobacterium isolated from a eutrophic freshwater pond Int J Syst Evol Microbiol, September 1, 2007; 57(9): 2125 - 2128. [Abstract] [Full Text] [PDF] |
||||
![]() |
J.-Y. Ying, B.-J. Wang, X. Dai, S.-S. Yang, S.-J. Liu, and Z.-P. Liu Wenxinia marina gen. nov., sp. nov., a novel member of the Roseobacter clade isolated from oilfield sediments of the South China Sea Int J Syst Evol Microbiol, August 1, 2007; 57(8): 1711 - 1716. [Abstract] [Full Text] [PDF] |
||||
![]() |
H. Kim, Y.-J. Choo, and J.-C. Cho Litoricolaceae fam. nov., to include Litoricola lipolytica gen. nov., sp. nov., a marine bacterium belonging to the order Oceanospirillales Int J Syst Evol Microbiol, August 1, 2007; 57(8): 1793 - 1798. [Abstract] [Full Text] [PDF] |
||||
![]() |
K. Lee, Y.-J. Choo, S. J. Giovannoni, and J.-C. Cho Ruegeria pelagia sp. nov., isolated from the Sargasso Sea, Atlantic Ocean Int J Syst Evol Microbiol, August 1, 2007; 57(8): 1815 - 1818. [Abstract] [Full Text] [PDF] |
||||
![]() |
K.-Y. Lin, S.-Y. Sheu, P.-S. Chang, J.-C. Cho, and W.-M. Chen Oceanicola marinus sp. nov., a marine alphaproteobacterium isolated from seawater collected off Taiwan Int J Syst Evol Microbiol, July 1, 2007; 57(7): 1625 - 1629. [Abstract] [Full Text] [PDF] |
||||
![]() |
K. Lee, Y.-J. Choo, S. J. Giovannoni, and J.-C. Cho Maritimibacter alkaliphilus gen. nov., sp. nov., a genome-sequenced marine bacterium of the Roseobacter clade in the order Rhodobacterales Int J Syst Evol Microbiol, July 1, 2007; 57(7): 1653 - 1658. [Abstract] [Full Text] [PDF] |
||||
![]() |
H. Kim, Y.-J. Choo, J. Song, J.-S. Lee, K. C. Lee, and J.-C. Cho Marinobacterium litorale sp. nov. in the order Oceanospirillales Int J Syst Evol Microbiol, July 1, 2007; 57(7): 1659 - 1662. [Abstract] [Full Text] [PDF] |
||||
![]() |
K. P. Williams, B. W. Sobral, and A. W. Dickerman A Robust Species Tree for the Alphaproteobacteria J. Bacteriol., July 1, 2007; 189(13): 4578 - 4586. [Abstract] [Full Text] [PDF] |
||||
![]() |
Y.-J. Choo, K. Lee, J. Song, and J.-C. Cho Puniceicoccus vermicola gen. nov., sp. nov., a novel marine bacterium, and description of Puniceicoccaceae fam. nov., Puniceicoccales ord. nov., Opitutaceae fam. nov., Opitutales ord. nov. and Opitutae classis nov. in the phylum 'Verrucomicrobia' Int J Syst Evol Microbiol, March 1, 2007; 57(3): 532 - 537. [Abstract] [Full Text] [PDF] |
||||
![]() |
J.-Y. Ying, Z.-P. Liu, B.-J. Wang, X. Dai, S.-S. Yang, and S.-J. Liu Salegentibacter catena sp. nov., isolated from sediment of the South China Sea, and emended description of the genus Salegentibacter Int J Syst Evol Microbiol, February 1, 2007; 57(2): 219 - 222. [Abstract] [Full Text] [PDF] |
||||
![]() |
J. Gu, H. Cai, S.-L. Yu, R. Qu, B. Yin, Y.-F. Guo, J.-Y. Zhao, and X.-L. Wu Marinobacter gudaonensis sp. nov., isolated from an oil-polluted saline soil in a Chinese oilfield Int J Syst Evol Microbiol, February 1, 2007; 57(2): 250 - 254. [Abstract] [Full Text] [PDF] |
||||
![]() |
D. H. Choi, J.-C. Cho, B. D. Lanoil, S. J. Giovannoni, and B. C. Cho Maribius salinus gen. nov., sp. nov., isolated from a solar saltern and Maribius pelagius sp. nov., cultured from the Sargasso Sea, belonging to the Roseobacter clade Int J Syst Evol Microbiol, February 1, 2007; 57(2): 270 - 275. [Abstract] [Full Text] [PDF] |
||||
![]() |
J.-Y. Ying, B.-J. Wang, S.-S. Yang, and S.-J. Liu Cyclobacterium lianum sp. nov., a marine bacterium isolated from sediment of an oilfield in the South China Sea, and emended description of the genus Cyclobacterium Int J Syst Evol Microbiol, December 1, 2006; 56(12): 2927 - 2930. [Abstract] [Full Text] [PDF] |
||||
![]() |
J.-C. Cho and S. J. Giovannoni Pelagibaca bermudensis gen. nov., sp. nov., a novel marine bacterium within the Roseobacter clade in the order Rhodobacterales. Int J Syst Evol Microbiol, April 1, 2006; 56(Pt 4): 855 - 859. [Abstract] [Full Text] [PDF] |
||||
![]() |
K.-B. Lee, C.-T. Liu, Y. Anzai, H. Kim, T. Aono, and H. Oyaizu The hierarchical system of the 'Alphaproteobacteria': description of Hyphomonadaceae fam. nov., Xanthobacteraceae fam. nov. and Erythrobacteraceae fam. nov. Int J Syst Evol Microbiol, September 1, 2005; 55(5): 1907 - 1919. [Abstract] [Full Text] [PDF] |
||||
![]() |
K. K. Kwon, H.-S. Lee, S. H. Yang, and S.-J. Kim Kordiimonas gwangyangensis gen. nov., sp. nov., a marine bacterium isolated from marine sediments that forms a distinct phyletic lineage (Kordiimonadales ord. nov.) in the 'Alphaproteobacteria' Int J Syst Evol Microbiol, September 1, 2005; 55(5): 2033 - 2037. [Abstract] [Full Text] [PDF] |
||||
![]() |
J.-C. Cho and S. J. Giovannoni Oceanicola granulosus gen. nov., sp. nov. and Oceanicola batsensis sp. nov., poly-{beta}-hydroxybutyrate-producing marine bacteria in the order 'Rhodobacterales' Int J Syst Evol Microbiol, July 1, 2004; 54(4): 1129 - 1136. [Abstract] [Full Text] [PDF] |
||||
![]() |
W.-R. Abraham, C. Strompl, M. Vancanneyt, A. Bennasar, J. Swings, H. Lunsdorf, J. Smit, and E. R. B. Moore Woodsholea maritima gen. nov., sp. nov., a marine bacterium with a low diversity of polar lipids Int J Syst Evol Microbiol, July 1, 2004; 54(4): 1227 - 1234. [Abstract] [Full Text] [PDF] |
||||
![]() |
J.-C. Cho and S. J. Giovannoni Cultivation and Growth Characteristics of a Diverse Group of Oligotrophic Marine Gammaproteobacteria Appl. Envir. Microbiol., January 1, 2004; 70(1): 432 - 440. [Abstract] [Full Text] [PDF] |
||||
| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |
| INT J SYST EVOL MICROBIOL | MICROBIOLOGY | J GEN VIROL |
| J MED MICROBIOL | ALL SGM JOURNALS | |