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Int J Syst Bacteriol 49 (1999), 51-65; DOI 10.1099/00207713-49-1-51
© 1999 Society for General Microbiology
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Diversity of rhizobia associated with Amorpha fruticosa isolated from Chinese soils and description of Mesorhizobium amorphae sp. nov.

E. T. Wang1,3, P. van Berkum2, X. H. Sui3, D. Beyene2, W. X. Chen3 and E. Martínez-Romero1

1Centro de Investigacién sobre Fijactón de Nitrógeno, UNAM, Apdo Postal 565-A, Cuernavaca, Morelos, Mexico
2Alfalfa and Soybean Research Laboratory, Agricultural Research Service, US Department of Agriculture, Beltsville, MD 20705, USA
3Department of Microbiology, College of Biology, China Agricultural University, Beijing 100094, People's Republic of China

Author for correspondence: E. T. Wang. Tel: +52 73 131697. Fax: +52 73 175581. e-mail: ewang{at}cifn.unam.mx

ABSTRACT

Fifty-five Chinese isolates from nodules of Amorpha fruticosa were characterized and compared with the type strains of the species and genera of bacteria which form nitrogen-fixing symbioses with leguminous host plants. A polyphasic approach, which included RFLP of PCR-amplified 16S rRNA genes, multilocus enzyme electrophoresis (MLEE), DNA-DNA hybridization, 16S rRNA gene sequencing, electrophoretic plasmid profiles, cross-nodulation and a phenotypic study, was used in the comparative analysis. The isolates originated from several different sites in China and they varied in their phenotypic and genetic characteristics. The majority of the isolates had moderate to slow growth rates, produced acid on YMA and harboured a 930 kb symbiotic plasmid (pSym). Five different RFLP patterns were identified among the 16S rRNA genes of all the isolates. Isolates grouped by PCR-RFLP of the 16S rRNA genes were also separated into groups by variation in MLEE profiles and by DNA-DNA hybridization. A representative isolate from each of these DNA homology groups had a separate position in a phylogenetic tree as determine from sequencing analysis of the 16S rRNA genes. A new species, Mesorhizobium amorphae, is proposed for the majority of the isolates, which belonged to a moderately slow- to slow-growing, acid-producing group based upon their distinct phylogenetic position, their unique electrophoretic type, their low DNA homology with reference strains representing the species within the genus Mesorhizobium and their distinct phenotypic features. Strain ACCC 19665 was chosen as the type strain for M. amorphae sp. nov.


Key Words: Mesorhizobium amorphaeAmorpha fruticosa • polyphasic taxonomy • diversity • rhizobia

The GenBank accession numbers for the 16S rRNA gene sequences of isolates ACCC 19665T, ACCC 19667, H15003, HL56 and SH283012, and of M. tianshanense A-1BSTare AF041442--AF041447, respectively.




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