| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |
|
|
|
|||||||
|
|||||||||
1Laboratoire d'Ecologie Microbienne du Sol, UMR5557 CNRS-Université Lyon 1,43 Bd du 11 Novembre 1918, 69 622 Villeurbanne cedex, France
2ENSBANA, Campus Universitaire de Montmuzard, 2 Bd Gabriel, 21000 Dijon, France
3SARDI Field Crops Pathology Unit, Waite Research Precinct, Glen Osmond, SA 5064, Australia
Author for correspondence: Véronique Viallard. Tel: +33 4 72 44 80 00. Fax: +33 4 72 43 12 23. e-mail: lemsl{at}biomserv.univ-lyon.fr
ABSTRACT
In a survey of soil and wheat or maize rhizoplane bacteria isolated using a medium containing azelaic acid and tryptamine as sole carbon and nitrogen sources, respectively, a large proportion of Burkholderia-like bacteria were found. Among them, a homogeneous group of strains was identifiable based on phenotypic properties, fatty acid composition, DNA-DNA hybridizations and 16S rDNA sequences. According to molecular data, this group belongs to the genus Burkholderia but its weak similarity to previously described species suggests that it belongs to a novel species. Closest 16S rDNA phylogenetic neighbours of this species are Burkholderia caryophylli and two previously named Pseudomonas species which clearly appear to be part of the Burkholderia genus and were thus named Burkholderia glathei comb. nov. and Burkholderia phenazinium comb. nov. Strains of the new species are oxidase-and catalase-positive, produce indole and gelatinase, and use L-xylose, lactose, rhamnose, trehalose, D-lyxose, L-arabitol, xylitol and D-raffinose as sole carbon source. This novel taxon is named Burkholderia graminis. In the course of this study, [Pseudomonas] pyrrocinia also proved to be a member of the Burkholderia genus.
Key Words: Burkholderia graminis sp. nov. • genus Burkholderia • phenotypic analysis • genotypic analysis
The GenBank accession numbers for the sequences reported in this paper are U96927-U96941.
This article has been cited by other articles:
|
|
 |
|
  Z. R. Suarez-Moreno, J. Caballero-Mellado, and V. Venturi The new group of non-pathogenic plant-associated nitrogen-fixing Burkholderia spp. shares a conserved quorum-sensing system, which is tightly regulated by the RsaL repressor Microbiology, July 1, 2008; 154(7): 2048 - 2059. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 E. Vanlaere, J. R. van der Meer, E. Falsen, J. F. Salles, E. de Brandt, and P. Vandamme Burkholderia sartisoli sp. nov., isolated from a polycyclic aromatic hydrocarbon-contaminated soil Int J Syst Evol Microbiol, February 1, 2008; 58(2): 420 - 423. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
L. P. Partida-Martinez, I. Groth, I. Schmitt, W. Richter, M. Roth, and C. Hertweck Burkholderia rhizoxinica sp. nov. and Burkholderia endofungorum sp. nov., bacterial endosymbionts of the plant-pathogenic fungus Rhizopus microsporus Int J Syst Evol Microbiol, November 1, 2007; 57(11): 2583 - 2590. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 J. B. Weinberg, B. D. Alexander, J. M. Majure, L. W. Williams, J. Y. Kim, P. Vandamme, and J. J. LiPuma Burkholderia glumae Infection in an Infant with Chronic Granulomatous Disease J. Clin. Microbiol., February 1, 2007; 45(2): 662 - 665. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 P. S. G. Chain, V. J. Denef, K. T. Konstantinidis, L. M. Vergez, L. Agullo, V. L. Reyes, L. Hauser, M. Cordova, L. Gomez, M. Gonzalez, et al. Inaugural Article: Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility PNAS, October 17, 2006; 103(42): 15280 - 15287. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 L. Perin, L. Martinez-Aguilar, R. Castro-Gonzalez, P. Estrada-de los Santos, T. Cabellos-Avelar, H. V. Guedes, V. M. Reis, and J. Caballero-Mellado Diazotrophic burkholderia species associated with field-grown maize and sugarcane. Appl. Envir. Microbiol., May 1, 2006; 72(5): 3103 - 3110. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
A. Ramette, J. J. LiPuma, and J. M. Tiedje Species Abundance and Diversity of Burkholderia cepacia Complex in the Environment Appl. Envir. Microbiol., March 1, 2005; 71(3): 1193 - 1201. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 K. A. Mattos, A. R. Todeschini, N. Heise, C. Jones, J. O. Previato, and L. Mendonca-Previato Nitrogen-fixing bacterium Burkholderia brasiliensis produces a novel yersiniose A-containing O-polysaccharide Glycobiology, March 1, 2005; 15(3): 313 - 321. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S. Van Oevelen, R. De Wachter, P. Vandamme, E. Robbrecht, and E. Prinsen 'Candidatus Burkholderia calva' and 'Candidatus Burkholderia nigropunctata' as leaf gall endosymbionts of African Psychotria Int J Syst Evol Microbiol, November 1, 2004; 54(6): 2237 - 2239. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
J. Goris, P. De Vos, J. Caballero-Mellado, J. Park, E. Falsen, J. F. Quensen III, J. M. Tiedje, and P. Vandamme Classification of the biphenyl- and polychlorinated biphenyl-degrading strain LB400T and relatives as Burkholderia xenovorans sp. nov. Int J Syst Evol Microbiol, September 1, 2004; 54(5): 1677 - 1681. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
J. Caballero-Mellado, L. Martinez-Aguilar, G. Paredes-Valdez, and P. E.-d. l. Santos Burkholderia unamae sp. nov., an N2-fixing rhizospheric and endophytic species Int J Syst Evol Microbiol, July 1, 2004; 54(4): 1165 - 1172. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
L. Ranjard, S. Nazaret, and B. Cournoyer Freshwater Bacteria Can Methylate Selenium through the Thiopurine Methyltransferase Pathway Appl. Envir. Microbiol., July 1, 2003; 69(7): 3784 - 3790. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
V. Ramisse, J. Balandreau, F. Thibault, D. Vidal, G. Vergnaud, and P. Normand DNA-DNA hybridization study of Burkholderia species using genomic DNA macro-array analysis coupled to reverse genome probing Int J Syst Evol Microbiol, May 1, 2003; 53(3): 739 - 746. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
M. S. Wilson, J. B. Herrick, C. O. Jeon, D. E. Hinman, and E. L. Madsen Horizontal Transfer of phnAc Dioxygenase Genes within One of Two Phenotypically and Genotypically Distinctive Naphthalene-Degrading Guilds from Adjacent Soil Environments Appl. Envir. Microbiol., April 1, 2003; 69(4): 2172 - 2181. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
P. van Dillewijn, P. J. Villadas, and N. Toro Effect of a Sinorhizobium meliloti Strain with a Modified putA Gene on the Rhizosphere Microbial Community of Alfalfa Appl. Envir. Microbiol., September 1, 2002; 68(9): 4201 - 4208. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
J. F. Salles, F. A. De Souza, and J. D. van Elsas Molecular Method To Assess the Diversity of Burkholderia Species in Environmental Samples Appl. Envir. Microbiol., April 1, 2002; 68(4): 1595 - 1603. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
T. Coenye, P. Vandamme, J. R. W. Govan, and J. J. LiPuma Taxonomy and Identification of the Burkholderia cepacia Complex J. Clin. Microbiol., October 1, 2001; 39(10): 3427 - 3436. [Full Text] [PDF]
|
|
|
|
|
|
E. R. Master and W. W. Mohn Induction of bphA, Encoding Biphenyl Dioxygenase, in Two Polychlorinated Biphenyl-Degrading Bacteria, Psychrotolerant Pseudomonas Strain Cam-1 and Mesophilic Burkholderia Strain LB400 Appl. Envir. Microbiol., June 1, 2001; 67(6): 2669 - 2676. [Abstract] [Full Text]
|
|
|
|
|
|
P. Estrada-De Los Santos, R. Bustillos-Cristales, and J. Caballero-Mellado Burkholderia, a Genus Rich in Plant-Associated Nitrogen Fixers with Wide Environmental and Geographic Distribution Appl. Envir. Microbiol., June 1, 2001; 67(6): 2790 - 2798. [Abstract] [Full Text]
|
|
|
|
|
|
J. Balandreau, V. Viallard, B. Cournoyer, T. Coenye, S. Laevens, and P. Vandamme Burkholderia cepacia Genomovar III Is a Common Plant-Associated Bacterium Appl. Envir. Microbiol., February 1, 2001; 67(2): 982 - 985. [Abstract] [Full Text]
|
|
|
|
|
|
C. M. Arnett, J. V. Parales, and J. D. Haddock Influence of Chlorine Substituents on Rates of Oxidation of Chlorinated Biphenyls by the Biphenyl Dioxygenase of Burkholderia sp. Strain LB400 Appl. Envir. Microbiol., July 1, 2000; 66(7): 2928 - 2933. [Abstract] [Full Text]
|
|
|
|
|
|
K. Nüsslein and J. M. Tiedje Soil Bacterial Community Shift Correlated with Change from Forest to Pasture Vegetation in a Tropical Soil Appl. Envir. Microbiol., August 1, 1999; 65(8): 3622 - 3626. [Abstract] [Full Text]
|
|
|
|
|
|
C. Segonds, T. Heulin, N. Marty, and G. Chabanon Differentiation of Burkholderia Species by PCR-Restriction Fragment Length Polymorphism Analysis of the 16S rRNA Gene and Application to Cystic Fibrosis Isolates J. Clin. Microbiol., July 1, 1999; 37(7): 2201 - 2208. [Abstract] [Full Text]
|
|
|
|
|
|
A. Bauernfeind, I. Schneider, R. Jungwirth, and C. Roller Discrimination of Burkholderia multivorans and Burkholderia vietnamiensis from Burkholderia cepacia Genomovars I, III, and IV by PCR J. Clin. Microbiol., May 1, 1999; 37(5): 1335 - 1339. [Abstract] [Full Text]
|
|
| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |
| INT J SYST EVOL MICROBIOL | MICROBIOLOGY | J GEN VIROL |
| J MED MICROBIOL | ALL SGM JOURNALS | |
