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Department of Microbiology, The Medical School, Framlington Place, Newcastle upon Tyne NE2 4HH, UK
Author for correspondence: Seung Bum Kim. Tel: +44 191 222 6000 ext. 8609. Fax: +44 191 222 7736. e-mail: s.b.kim{at}newcastle.ac.uk
ABSTRACT
Four moderately thermophilic, carboxydotrophic streptomycetes were the subject of a comparative taxonomic investigation designed to establish their taxonomic relationships. Almost complete sequences of the 16S rRNA genes of the test strains were determined following the isolation and direct sequencing of the amplified genes. The resultant nucleotide sequences were aligned with the sequences of previously studied streptomycetes, and phylogenetic trees generated by using the neighbour-joining, Fitch-Margoliash, maximum-likelihood and maximum-parsimony methods. It was evident from the phylogenetic analyses that strains AT50, AT51 and AT52 were most closely related to Streptomyces thermodiastaticus DSM 40573T and strain AT37 to Streptomyces glaucescens DSM 40716 and Streptomyces pseudogriseolus NRRL 3985. Random DNA amplification profiles clearly distinguished strains AT50, AT51 and AT52 from Streptomyces thermodiastaticus and from strain AT37. The molecular systematic evidence, together with phenotypic data derived from this and previous studies, indicate that the test strains merit species status within the genus Streptomyces. The name Streptomyces thermocarboxydovorans sp. nov. is proposed for strains AT50, AT51 and AT52 (type strain) and Streptomyces thermocarboxydus sp. nov. for strain AT37.
Key Words: Streptomyces thermocarboxydovorans sp. nov. • Streptomyces thermocarboxydus sp. nov. • thermophile • carboxydotrophy • soil
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S. B. Kim, O. I. Nedashkovskaya, V. V. Mikhailov, S. K. Han, K.-O. Kim, M.-S. Rhee, and K. S. Bae Kocuria marina sp. nov., a novel actinobacterium isolated from marine sediment Int J Syst Evol Microbiol, September 1, 2004; 54(5): 1617 - 1620. [Abstract] [Full Text] [PDF]
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O. I. Nedashkovskaya, S. B. Kim, S. K. Han, A. M. Lysenko, M. Rohde, M.-S. Rhee, G. M. Frolova, E. Falsen, V. V. Mikhailov, and K. S. Bae Maribacter gen. nov., a new member of the family Flavobacteriaceae, isolated from marine habitats, containing the species Maribacter sedimenticola sp. nov., Maribacter aquivivus sp. nov., Maribacter orientalis sp. nov. and Maribacter ulvicola sp. nov. Int J Syst Evol Microbiol, July 1, 2004; 54(4): 1017 - 1023. [Abstract] [Full Text] [PDF]
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O. I. Nedashkovskaya, S. B. Kim, S. K. Han, A. M. Lysenko, V. V. Mikhailov, and K. S. Bae Arenibacter certesii sp. nov., a novel marine bacterium isolated from the green alga Ulva fenestrata Int J Syst Evol Microbiol, July 1, 2004; 54(4): 1173 - 1176. [Abstract] [Full Text] [PDF]
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O. I. Nedashkovskaya, S. B. Kim, S. K. Han, M.-S. Rhee, A. M. Lysenko, M. Rohde, N. V. Zhukova, G. M. Frolova, V. V. Mikhailov, and K. S. Bae Algibacter lectus gen. nov., sp. nov., a novel member of the family Flavobacteriaceae isolated from green algae Int J Syst Evol Microbiol, July 1, 2004; 54(4): 1257 - 1261. [Abstract] [Full Text] [PDF]
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A. L. Jones, J. M. Brown, V. Mishra, J. D. Perry, A. G. Steigerwalt, and M. Goodfellow Rhodococcus gordoniae sp. nov., an actinomycete isolated from clinical material and phenol-contaminated soil Int J Syst Evol Microbiol, March 1, 2004; 54(2): 407 - 411. [Abstract] [Full Text] [PDF]
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O. I. Nedashkovskaya, S. B. Kim, S. K. Han, M. S. Rhee, A. M. Lysenko, E. Falsen, G. M. Frolova, V. V. Mikhailov, and K. S. Bae Ulvibacter litoralis gen. nov., sp. nov., a novel member of the family Flavobacteriaceae isolated from the green alga Ulva fenestrata Int J Syst Evol Microbiol, January 1, 2004; 54(1): 119 - 123. [Abstract] [Full Text] [PDF]
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S. B. Kim, C. N. Seong, S. J. Jeon, K. S. Bae, and M. Goodfellow Taxonomic study of neutrotolerant acidophilic actinomycetes isolated from soil and description of Streptomyces yeochonensis sp. nov. Int J Syst Evol Microbiol, January 1, 2004; 54(1): 211 - 214. [Abstract] [Full Text] [PDF]
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O. I. Nedashkovskaya, S. B. Kim, S. K. Han, A. M. Lysenko, M. Rohde, N. V. Zhukova, E. Falsen, G. M. Frolova, V. V. Mikhailov, and K. S. Bae Mesonia algae gen. nov., sp. nov., a novel marine bacterium of the family Flavobacteriaceae isolated from the green alga Acrosiphonia sonderi (Kutz) Kornm Int J Syst Evol Microbiol, November 1, 2003; 53(6): 1967 - 1971. [Abstract] [Full Text] [PDF]
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S. K. Han, O. I. Nedashkovskaya, V. V. Mikhailov, S. B. Kim, and K. S. Bae Salinibacterium amurskyense gen. nov., sp. nov., a novel genus of the family Microbacteriaceae from the marine environment Int J Syst Evol Microbiol, November 1, 2003; 53(6): 2061 - 2066. [Abstract] [Full Text] [PDF]
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Z. Lu, L. Wang, Y. Zhang, Y. Shi, Z. Liu, E. T. Quintana, and M. Goodfellow Actinomadura catellatispora sp. nov. and Actinomadura glauciflava sp. nov., from a sewage ditch and soil in southern China Int J Syst Evol Microbiol, January 1, 2003; 53(1): 137 - 142. [Abstract] [Full Text] [PDF]
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P. Petrosyan, M. Garcia-Varela, A. Luz-Madrigal, C. Huitron, and M. E. Flores Streptomyces mexicanus sp. nov., a xylanolytic micro-organism isolated from soil Int J Syst Evol Microbiol, January 1, 2003; 53(1): 269 - 273. [Abstract] [Full Text] [PDF]
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