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Int J Syst Bacteriol 44 (1994), 440-446; DOI 10.1099/00207713-44-3-440
© 1994 Society for General Microbiology
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Phylogenetic Classification of Phytopathogenic Mollicutes by Sequence Analysis of 16S Ribosomal DNA

ERICH SEEMüLLER1,*, BERND SCHNEIDER1, RAINER MÄURER1, ULRICH AHRENS1, XAVIER DAIRE2, HEIKE KISON1, KARL-HEINZ LORENZ1, GIUSEPPE FIRRAO3, LIDON AVINENT4, BARBARA B. SEARS5 and ERKO STACKEBRANDT6

1 Biologische Bundesanstalt für Land- und Forstwirtschaft, Institut für Pflanzenschutz im Obstbau, D-69216 Dossenheim, Germany
2 Station de Recherches sur les Mycoplasmes et les Arbovirus des Plantes, Institut National de la Recherche Agronomique, F-21034 Dijon Cedex, France
3 Università degli studi di Udine, Dipartimento di Biologia Applicata alla Difesa delle Piante, I-33100 Udine, Italy
4 Instituto Valenciano de Investigaciones Agrarias, E-46113 Moncada (Valencia), Spain
5 Department of Botany and Plant Pathology, Michigan State University, East Lansing, Michigan 48824
6 German Collection of Microorganisms and Cell Cultures D-38124 Braunschweig, Germany

* Corresponding author. Phone: 49 6221 85238. Fax: 49 6221 861222. Electronic mail address: ba69ed{at}genius.embnet.dkfz-heidel-berg.de.

ABSTRACT

The phylogenetic relationships of 17 phytopathogenic mycoplasmalike organisms (MLOs) representing seven major taxonomic groups established on the basis of MLO 16S ribosomal DNA (rDNA) restriction patterns were examined by performing a sequence analysis of the 16S rDNA gene. The sequence data showed that the MLOs which we examined are members of a relatively homogeneous group that evolved monophyl-etically from a common ancestor. In agreement with results obtained previously with other MLOs, our results also revealed that the organisms are more closely related to Acholeplasma laidlawii and other members of the anaeroplasma clade than to any other mollicutes. A phylogenetic tree based on 16S rDNAs showed that the MLOs which we examined can be divided into the following five primary clusters: (i) the aster yellows strain cluster; (ii) the apple proliferation strain cluster; (iii) the western-X disease strain cluster; (iv) the sugarcane white leaf strain cluster; and (v) the elm yellows strain cluster. The aster yellows, western-X disease, and elm yellows strain clusters were divided into two subgroups each. MLOs whose 16S rDNA sequences have been determined previously by other workers can be placed in one of the five groups. In addition to the overall division based on 16S rDNA sequence homology data, the primary clusters and subgroups could be further defined by a number of positions in the 16S rDNAs that exhibited characteristic compositions, especially in the variable regions of the gene.




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